Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.74■□□□□ 0.27
RNF31Q96EP0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF31Q96EP0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF31Q96EP0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
RNF31Q96EP0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF31Q96EP0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF31Q96EP0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF31Q96EP0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF31Q96EP0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
RNF31Q96EP0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF31Q96EP0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF31Q96EP0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF31Q96EP0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RNF31Q96EP0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RNF31Q96EP0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RNF31Q96EP0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF31Q96EP0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 PGAM5P1-201ENST00000518923 814 ntBASIC16.73■□□□□ 0.27
RNF31Q96EP0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF31Q96EP0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF31Q96EP0 AC109462.3-201ENST00000573934 613 ntBASIC16.73■□□□□ 0.27
RNF31Q96EP0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF31Q96EP0 AL139424.1-201ENST00000607572 797 ntBASIC16.73■□□□□ 0.27
RNF31Q96EP0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF31Q96EP0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF31Q96EP0 PCDHA12-202ENST00000613593 2588 ntBASIC16.73■□□□□ 0.27
RNF31Q96EP0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF31Q96EP0 AC132938.5-201ENST00000624980 1813 ntBASIC16.73■□□□□ 0.27
RNF31Q96EP0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 AC096633.1-201ENST00000422446 749 ntBASIC16.72■□□□□ 0.27
RNF31Q96EP0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 KRT18P3-201ENST00000451602 1288 ntBASIC16.72■□□□□ 0.27
RNF31Q96EP0 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.72■□□□□ 0.27
RNF31Q96EP0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 AC027601.4-201ENST00000611259 610 ntBASIC16.72■□□□□ 0.27
RNF31Q96EP0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 AL022326.1-202ENST00000641533 845 ntBASIC16.72■□□□□ 0.27
RNF31Q96EP0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF31Q96EP0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF31Q96EP0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF31Q96EP0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF31Q96EP0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF31Q96EP0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF31Q96EP0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF31Q96EP0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF31Q96EP0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms