Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 DDX43P3-201ENST00000441064 443 ntBASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 AL022342.1-201ENST00000400363 863 ntBASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 AC018712.1-201ENST00000455767 687 ntBASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 AC010460.3-201ENST00000511359 1579 ntBASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SH3KBP1Q96B97 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 BX276092.7-203ENST00000637198 1536 ntBASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 AL590627.1-203ENST00000421194 1026 ntBASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 AC006116.8-202ENST00000587620 1550 ntBASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SH3KBP1Q96B97 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SH3KBP1Q96B97 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.17■□□□□ 0.34
SH3KBP1Q96B97 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SH3KBP1Q96B97 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SH3KBP1Q96B97 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SH3KBP1Q96B97 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms