Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 FOSL1P1-201ENST00000511041 816 ntBASIC16.66■□□□□ 0.26
UBE2E3Q969T4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 LINC02012-201ENST00000608206 1725 ntBASIC16.66■□□□□ 0.26
UBE2E3Q969T4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.66■□□□□ 0.26
UBE2E3Q969T4 AL121761.2-201ENST00000598007 1648 ntBASIC16.66■□□□□ 0.26
UBE2E3Q969T4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.66■□□□□ 0.26
UBE2E3Q969T4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.65■□□□□ 0.26
UBE2E3Q969T4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2E3Q969T4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 RBM17P3-201ENST00000417687 1192 ntBASIC16.64■□□□□ 0.25
UBE2E3Q969T4 AC132008.2-207ENST00000454517 770 ntBASIC16.64■□□□□ 0.25
UBE2E3Q969T4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 PRELID1P1-202ENST00000567272 903 ntBASIC16.64■□□□□ 0.25
UBE2E3Q969T4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 LINC01711-201ENST00000598340 967 ntBASIC16.64■□□□□ 0.25
UBE2E3Q969T4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 AC073592.4-201ENST00000623827 446 ntBASIC16.64■□□□□ 0.25
UBE2E3Q969T4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms