Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 AC010460.3-201ENST00000511359 1579 ntBASIC18.29■□□□□ 0.52
ATP2A3Q93084 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A3Q93084 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2A3Q93084 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
ATP2A3Q93084 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ATP2A3Q93084 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
ATP2A3Q93084 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 LAGE3P1-201ENST00000425356 484 ntBASIC18.28■□□□□ 0.52
ATP2A3Q93084 DUTP2-201ENST00000519164 463 ntBASIC18.28■□□□□ 0.52
ATP2A3Q93084 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 AC012640.2-201ENST00000561606 901 ntBASIC18.28■□□□□ 0.52
ATP2A3Q93084 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 AC027601.4-201ENST00000611259 610 ntBASIC18.28■□□□□ 0.52
ATP2A3Q93084 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.28■□□□□ 0.52
ATP2A3Q93084 PMPCAP1-201ENST00000508114 1576 ntBASIC18.28■□□□□ 0.52
ATP2A3Q93084 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ATP2A3Q93084 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP2A3Q93084 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 KRT8P47-201ENST00000604727 1398 ntBASIC18.28■□□□□ 0.52
ATP2A3Q93084 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2A3Q93084 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2A3Q93084 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ATP2A3Q93084 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2A3Q93084 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2A3Q93084 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2A3Q93084 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2A3Q93084 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2A3Q93084 AC103564.2-201ENST00000432853 1299 ntBASIC18.27■□□□□ 0.52
ATP2A3Q93084 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.27■□□□□ 0.52
ATP2A3Q93084 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP2A3Q93084 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP2A3Q93084 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.27■□□□□ 0.52
ATP2A3Q93084 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2A3Q93084 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2A3Q93084 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP2A3Q93084 AL022326.1-202ENST00000641533 845 ntBASIC18.27■□□□□ 0.52
ATP2A3Q93084 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2A3Q93084 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP2A3Q93084 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2A3Q93084 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP2A3Q93084 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.51
ATP2A3Q93084 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
ATP2A3Q93084 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
ATP2A3Q93084 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP2A3Q93084 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP2A3Q93084 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ATP2A3Q93084 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A3Q93084 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A3Q93084 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ATP2A3Q93084 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A3Q93084 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A3Q93084 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A3Q93084 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A3Q93084 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A3Q93084 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP2A3Q93084 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A3Q93084 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ATP2A3Q93084 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ATP2A3Q93084 BX842568.4-201ENST00000421222 227 ntBASIC18.26■□□□□ 0.51
ATP2A3Q93084 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP2A3Q93084 AL591424.1-201ENST00000442569 1213 ntBASIC18.26■□□□□ 0.51
ATP2A3Q93084 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A3Q93084 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.26■□□□□ 0.51
ATP2A3Q93084 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.26■□□□□ 0.51
ATP2A3Q93084 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A3Q93084 Z83851.2-201ENST00000609564 659 ntBASIC18.26■□□□□ 0.51
ATP2A3Q93084 FAM197Y3-203ENST00000618346 717 ntBASIC18.26■□□□□ 0.51
ATP2A3Q93084 AD001527.2-201ENST00000622994 785 ntBASIC18.26■□□□□ 0.51
ATP2A3Q93084 AC073592.4-201ENST00000623827 446 ntBASIC18.26■□□□□ 0.51
ATP2A3Q93084 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A3Q93084 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP2A3Q93084 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP2A3Q93084 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A3Q93084 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ATP2A3Q93084 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ATP2A3Q93084 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ATP2A3Q93084 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ATP2A3Q93084 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A3Q93084 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A3Q93084 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2A3Q93084 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP2A3Q93084 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.26■□□□□ 0.51
ATP2A3Q93084 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms