Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 AC073111.5-205ENST00000641717 521 ntBASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 AC104640.1-201ENST00000562617 2109 ntBASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 SLC29A4P1-201ENST00000398760 971 ntBASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 RPS2P4-201ENST00000476944 856 ntBASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 AC083880.1-201ENST00000608266 535 ntBASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 AC130371.2-201ENST00000619443 611 ntBASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM11BQ8TCY0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC11.27□□□□□ -0.6
SMIM11BQ8TCY0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.27□□□□□ -0.6
SMIM11BQ8TCY0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SMIM11BQ8TCY0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SMIM11BQ8TCY0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC11.27□□□□□ -0.6
SMIM11BQ8TCY0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SMIM11BQ8TCY0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SMIM11BQ8TCY0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SMIM11BQ8TCY0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
SMIM11BQ8TCY0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SMIM11BQ8TCY0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC11.27□□□□□ -0.6
SMIM11BQ8TCY0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SMIM11BQ8TCY0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms