Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 SLC25A1P3-201ENST00000395415 828 ntBASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 FITM1-202ENST00000559294 800 ntBASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 AL512604.3-201ENST00000569583 964 ntBASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 AC009154.2-201ENST00000621177 724 ntBASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IL1Q8TBN0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 AC009947.2-201ENST00000444014 672 ntBASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 RBM17P1-201ENST00000453646 1190 ntBASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 AC002558.1-201ENST00000488906 803 ntBASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 C2orf69P3-201ENST00000565542 1120 ntBASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 AC093525.9-201ENST00000624961 1746 ntBASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IL1Q8TBN0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms