Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 AC211486.1-202ENST00000416371 468 ntBASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 DNAJB3-202ENST00000449667 1266 ntBASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 ALG1L5P-201ENST00000482043 771 ntBASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 AC211476.1-201ENST00000503899 468 ntBASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 KRT18P55-202ENST00000578578 1546 ntBASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 MYCLP1-201ENST00000372451 1075 ntBASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 AC010654.1-201ENST00000615722 808 ntBASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SHKBP1Q8TBC3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 AP002414.1-201ENST00000391405 1147 ntBASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 MRPL20P1-201ENST00000400819 433 ntBASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 PMS2P2-201ENST00000425039 1128 ntBASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 AC005829.1-201ENST00000570002 483 ntBASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms