Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.89■□□□□ 0.29
HIPK4Q8NE63 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 AL390955.1-201ENST00000428694 934 ntBASIC16.88■□□□□ 0.29
HIPK4Q8NE63 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 LINC01451-201ENST00000623792 534 ntBASIC16.88■□□□□ 0.29
HIPK4Q8NE63 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.88■□□□□ 0.29
HIPK4Q8NE63 AC026691.1-201ENST00000602502 2017 ntBASIC16.87■□□□□ 0.29
HIPK4Q8NE63 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 RNF216P1-203ENST00000404404 2427 ntBASIC16.87■□□□□ 0.29
HIPK4Q8NE63 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 MIR1238-201ENST00000408483 83 ntBASIC16.87■□□□□ 0.29
HIPK4Q8NE63 TSPY7P-201ENST00000431358 1114 ntBASIC16.87■□□□□ 0.29
HIPK4Q8NE63 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 AC008550.1-201ENST00000511500 884 ntBASIC16.87■□□□□ 0.29
HIPK4Q8NE63 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK4Q8NE63 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HIPK4Q8NE63 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms