Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CFAP43Q8NDM7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CFAP43Q8NDM7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CFAP43Q8NDM7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CFAP43Q8NDM7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
CFAP43Q8NDM7 BSG-214ENST00000614867 960 ntTSL 3 BASIC26.81■■□□□ 1.88
CFAP43Q8NDM7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CFAP43Q8NDM7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CFAP43Q8NDM7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CFAP43Q8NDM7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
CFAP43Q8NDM7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CFAP43Q8NDM7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
CFAP43Q8NDM7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC26.81■■□□□ 1.88
CFAP43Q8NDM7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CFAP43Q8NDM7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 EGFEM1P-202ENST00000431685 1563 ntBASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 SPDYE14P-201ENST00000442619 822 ntBASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 RN7SL692P-201ENST00000464677 288 ntBASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 FAM86C2P-203ENST00000528684 1004 ntBASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 AL138688.1-201ENST00000624851 1594 ntBASIC26.79■■□□□ 1.88
CFAP43Q8NDM7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CFAP43Q8NDM7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC26.78■■□□□ 1.88
CFAP43Q8NDM7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC26.78■■□□□ 1.88
CFAP43Q8NDM7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CFAP43Q8NDM7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC26.78■■□□□ 1.88
CFAP43Q8NDM7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
CFAP43Q8NDM7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CFAP43Q8NDM7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC26.78■■□□□ 1.88
CFAP43Q8NDM7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC26.78■■□□□ 1.88
CFAP43Q8NDM7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 MRPS18AP1-201ENST00000414458 589 ntBASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 AC005237.2-201ENST00000434368 219 ntBASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 AL592309.1-201ENST00000443127 649 ntBASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
CFAP43Q8NDM7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
CFAP43Q8NDM7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
CFAP43Q8NDM7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 AC092580.3-201ENST00000430932 139 ntBASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 RARRES2P8-201ENST00000566335 367 ntBASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 AL358472.5-202ENST00000641448 1267 ntBASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC26.76■■□□□ 1.87
CFAP43Q8NDM7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC26.75■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms