Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.15□□□□□ -0.14
LRTM2Q8N967 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LRTM2Q8N967 AC103702.1-201ENST00000548801 2630 ntBASIC14.15□□□□□ -0.14
LRTM2Q8N967 AL662844.4-201ENST00000606367 2838 ntBASIC14.15□□□□□ -0.14
LRTM2Q8N967 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LRTM2Q8N967 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LRTM2Q8N967 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LRTM2Q8N967 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 MTCL1P1-201ENST00000446207 792 ntBASIC14.15□□□□□ -0.14
LRTM2Q8N967 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.15□□□□□ -0.14
LRTM2Q8N967 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.15□□□□□ -0.14
LRTM2Q8N967 IGHV3-52-201ENST00000519770 353 ntBASIC14.15□□□□□ -0.14
LRTM2Q8N967 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.15□□□□□ -0.14
LRTM2Q8N967 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.15□□□□□ -0.14
LRTM2Q8N967 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.15□□□□□ -0.14
LRTM2Q8N967 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
LRTM2Q8N967 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.15□□□□□ -0.14
LRTM2Q8N967 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LRTM2Q8N967 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRTM2Q8N967 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.15□□□□□ -0.14
LRTM2Q8N967 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.15□□□□□ -0.14
LRTM2Q8N967 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
LRTM2Q8N967 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LRTM2Q8N967 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRTM2Q8N967 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRTM2Q8N967 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRTM2Q8N967 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRTM2Q8N967 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRTM2Q8N967 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRTM2Q8N967 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRTM2Q8N967 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRTM2Q8N967 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.14□□□□□ -0.15
LRTM2Q8N967 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 UBE2SP1-201ENST00000450587 669 ntBASIC14.14□□□□□ -0.15
LRTM2Q8N967 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 AC034232.1-201ENST00000506026 1064 ntBASIC14.14□□□□□ -0.15
LRTM2Q8N967 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 AP000525.1-201ENST00000608286 694 ntBASIC14.14□□□□□ -0.15
LRTM2Q8N967 AC019129.2-201ENST00000609837 1235 ntBASIC14.14□□□□□ -0.15
LRTM2Q8N967 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRTM2Q8N967 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRTM2Q8N967 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRTM2Q8N967 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRTM2Q8N967 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRTM2Q8N967 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRTM2Q8N967 FRMD8P1-201ENST00000440433 1524 ntBASIC14.14□□□□□ -0.15
LRTM2Q8N967 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.14□□□□□ -0.15
LRTM2Q8N967 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.14□□□□□ -0.15
LRTM2Q8N967 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms