Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEFF1Q8IYR6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEFF1Q8IYR6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 BICD1-207ENST00000551848 1962 ntBASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 AC093520.2-201ENST00000561830 333 ntBASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 MIR4745-201ENST00000577608 62 ntBASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 AC138761.1-201ENST00000584393 385 ntBASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms