Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 AC148477.5-201ENST00000625164 1645 ntBASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 AC079776.2-201ENST00000641154 1609 ntBASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC65Q8IXS2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 LINC02012-201ENST00000608206 1725 ntBASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 AC106795.1-205ENST00000512851 1056 ntBASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 AC073592.4-201ENST00000623827 446 ntBASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC65Q8IXS2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 OR6D1P-203ENST00000641209 4860 ntBASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 RBM17P3-201ENST00000417687 1192 ntBASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC65Q8IXS2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 LINC01711-201ENST00000598340 967 ntBASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms