Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 TIMM8BP1-201ENST00000452384 211 ntBASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 AC093520.2-201ENST00000561830 333 ntBASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 AC007613.1-201ENST00000572811 2597 ntBASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 LINC00628-201ENST00000628516 1289 ntBASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NPAS3Q8IXF0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 AL355306.1-201ENST00000415580 579 ntBASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 AL096865.1-201ENST00000606796 927 ntBASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 AL139327.4-201ENST00000612362 153 ntBASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.84■□□□□ 0.45
NPAS3Q8IXF0 AL390961.4-201ENST00000623958 2535 ntBASIC17.83■□□□□ 0.45
NPAS3Q8IXF0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
NPAS3Q8IXF0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.83■□□□□ 0.45
NPAS3Q8IXF0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS3Q8IXF0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS3Q8IXF0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NPAS3Q8IXF0 AL035633.1-201ENST00000406139 838 ntBASIC17.83■□□□□ 0.44
NPAS3Q8IXF0 AL627223.1-201ENST00000416693 442 ntBASIC17.83■□□□□ 0.44
NPAS3Q8IXF0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.83■□□□□ 0.44
NPAS3Q8IXF0 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.83■□□□□ 0.44
NPAS3Q8IXF0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.83■□□□□ 0.44
NPAS3Q8IXF0 AC099522.2-201ENST00000607001 744 ntBASIC17.83■□□□□ 0.44
NPAS3Q8IXF0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS3Q8IXF0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS3Q8IXF0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS3Q8IXF0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS3Q8IXF0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
NPAS3Q8IXF0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS3Q8IXF0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS3Q8IXF0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS3Q8IXF0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS3Q8IXF0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.82■□□□□ 0.44
NPAS3Q8IXF0 BICD1-207ENST00000551848 1962 ntBASIC17.82■□□□□ 0.44
NPAS3Q8IXF0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS3Q8IXF0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS3Q8IXF0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NPAS3Q8IXF0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms