Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 AL136038.4-201ENST00000603606 1261 ntBASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 AC092171.3-201ENST00000610122 2651 ntBASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
NUDCD3Q8IVD9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 AC079602.3-201ENST00000623931 403 ntBASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUDCD3Q8IVD9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms