Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 RN7SL606P-201ENST00000472779 293 ntBASIC16.27■□□□□ 0.2
CCDC71Q8IV32 AP002469.2-201ENST00000531724 424 ntBASIC16.27■□□□□ 0.2
CCDC71Q8IV32 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 AC009065.1-201ENST00000564055 1225 ntBASIC16.27■□□□□ 0.2
CCDC71Q8IV32 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 AL353801.3-201ENST00000609898 542 ntBASIC16.27■□□□□ 0.2
CCDC71Q8IV32 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.19
CCDC71Q8IV32 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 NSUN5P1-202ENST00000421140 1535 ntBASIC16.26■□□□□ 0.19
CCDC71Q8IV32 NSUN5P2-203ENST00000457352 1529 ntBASIC16.26■□□□□ 0.19
CCDC71Q8IV32 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 AL022342.1-201ENST00000400363 863 ntBASIC16.26■□□□□ 0.19
CCDC71Q8IV32 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 NUS1P2-201ENST00000417358 873 ntBASIC16.26■□□□□ 0.19
CCDC71Q8IV32 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 VENTXP7-201ENST00000475503 772 ntBASIC16.26■□□□□ 0.19
CCDC71Q8IV32 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 AC091607.1-201ENST00000490318 1060 ntBASIC16.26■□□□□ 0.19
CCDC71Q8IV32 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 AP005901.3-202ENST00000581653 237 ntBASIC16.26■□□□□ 0.19
CCDC71Q8IV32 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC71Q8IV32 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 AC009949.1-201ENST00000623048 1830 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms