Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 RPL13AP23-201ENST00000480739 586 ntBASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 FZD10-202ENST00000539839 3282 ntBASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 RPS15P9-201ENST00000494093 319 ntBASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 RNA5SP415-201ENST00000517246 115 ntBASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 AL805961.1-202ENST00000641562 540 ntBASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM4Q86VH4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 AL590787.1-201ENST00000568856 1315 ntBASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 LINC00896-202ENST00000609602 2128 ntBASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 SLC25A1P1-201ENST00000528351 927 ntBASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 AC145285.3-201ENST00000564603 959 ntBASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM4Q86VH4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM4Q86VH4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM4Q86VH4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM4Q86VH4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms