Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.07■□□□□ 0.16
ZFHX4Q86UP3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.07■□□□□ 0.16
ZFHX4Q86UP3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZFHX4Q86UP3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZFHX4Q86UP3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.07■□□□□ 0.16
ZFHX4Q86UP3 COX5BP2-201ENST00000392354 334 ntBASIC16.07■□□□□ 0.16
ZFHX4Q86UP3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZFHX4Q86UP3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
ZFHX4Q86UP3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 AC002056.1-201ENST00000395613 760 ntBASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 AL355994.2-201ENST00000447882 704 ntBASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 AC026150.2-201ENST00000564693 1156 ntBASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 LINC00982-205ENST00000420957 435 ntBASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 MIR4706-201ENST00000582134 82 ntBASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZFHX4Q86UP3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 KRT8P19-201ENST00000551916 1455 ntBASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 AC093010.1-201ENST00000473625 1624 ntBASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 AC098614.1-201ENST00000368528 745 ntBASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZFHX4Q86UP3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 TUBB1P2-201ENST00000422712 1306 ntBASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 TUBB1P1-201ENST00000503144 1300 ntBASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 LDHBP1-201ENST00000455730 1119 ntBASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ZFHX4Q86UP3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms