Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CSMD2Q7Z408 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.43□□□□□ -0.1
CSMD2Q7Z408 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.43□□□□□ -0.1
CSMD2Q7Z408 ACTG1P4-201ENST00000425123 1122 ntBASIC14.43□□□□□ -0.1
CSMD2Q7Z408 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.43□□□□□ -0.1
CSMD2Q7Z408 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.43□□□□□ -0.1
CSMD2Q7Z408 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD2Q7Z408 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.43□□□□□ -0.1
CSMD2Q7Z408 AL590560.3-201ENST00000623350 461 ntBASIC14.43□□□□□ -0.1
CSMD2Q7Z408 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD2Q7Z408 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.43□□□□□ -0.1
CSMD2Q7Z408 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CSMD2Q7Z408 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.43□□□□□ -0.1
CSMD2Q7Z408 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 REXO1L9P-201ENST00000604264 2108 ntBASIC14.42□□□□□ -0.1
CSMD2Q7Z408 ANKRD19P-201ENST00000338192 862 ntBASIC14.42□□□□□ -0.1
CSMD2Q7Z408 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 AC068587.10-201ENST00000641210 219 ntBASIC14.42□□□□□ -0.1
CSMD2Q7Z408 AL109936.8-201ENST00000641772 604 ntBASIC14.42□□□□□ -0.1
CSMD2Q7Z408 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 AL353779.1-201ENST00000434793 351 ntBASIC14.42□□□□□ -0.1
CSMD2Q7Z408 STK19B-204ENST00000512515 211 ntBASIC14.42□□□□□ -0.1
CSMD2Q7Z408 ALG1L8P-201ENST00000533887 760 ntBASIC14.42□□□□□ -0.1
CSMD2Q7Z408 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 AC087163.2-201ENST00000457299 853 ntBASIC14.42□□□□□ -0.1
CSMD2Q7Z408 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.42□□□□□ -0.1
CSMD2Q7Z408 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 AC022210.1-201ENST00000449856 793 ntBASIC14.41□□□□□ -0.1
CSMD2Q7Z408 AL583810.1-201ENST00000553344 1045 ntBASIC14.41□□□□□ -0.1
CSMD2Q7Z408 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.41□□□□□ -0.1
CSMD2Q7Z408 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 AC109635.5-201ENST00000533593 962 ntBASIC14.4□□□□□ -0.1
CSMD2Q7Z408 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD2Q7Z408 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms