Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 AC009102.3-201ENST00000623118 1491 ntBASIC16.05■□□□□ 0.16
TUBA1AQ71U36 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 HBZP1-201ENST00000354915 429 ntBASIC16.05■□□□□ 0.16
TUBA1AQ71U36 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 MIR149-201ENST00000384879 89 ntBASIC16.05■□□□□ 0.16
TUBA1AQ71U36 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 SDHAP2-201ENST00000455183 2001 ntBASIC16.05■□□□□ 0.16
TUBA1AQ71U36 AC026691.1-201ENST00000602502 2017 ntBASIC16.05■□□□□ 0.16
TUBA1AQ71U36 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBA1AQ71U36 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 SPDYE13P-201ENST00000445314 798 ntBASIC16.04■□□□□ 0.16
TUBA1AQ71U36 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 ZNF444P1-201ENST00000559497 298 ntBASIC16.04■□□□□ 0.16
TUBA1AQ71U36 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA1AQ71U36 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 AC009065.1-201ENST00000564055 1225 ntBASIC16.03■□□□□ 0.16
TUBA1AQ71U36 MIR3180-4-201ENST00000582223 153 ntBASIC16.03■□□□□ 0.16
TUBA1AQ71U36 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA1AQ71U36 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms