Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 AC025580.3-201ENST00000617932 1424 ntBASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 PAWRP1-201ENST00000451083 565 ntBASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 ELL2P1-201ENST00000413990 1906 ntBASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 HTR7P1-202ENST00000624664 4411 ntBASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC62Q6P9F0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 AC254562.1-201ENST00000417586 456 ntBASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 AL596442.2-201ENST00000610240 980 ntBASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC62Q6P9F0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 AC006116.8-202ENST00000587620 1550 ntBASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 FAM185BP-201ENST00000443595 716 ntBASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 CXCL1P1-201ENST00000502804 216 ntBASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 AL031432.2-201ENST00000566714 459 ntBASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 AL928711.1-201ENST00000570165 459 ntBASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC62Q6P9F0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 LINC00304-203ENST00000565008 1864 ntBASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms