Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 AC010654.1-201ENST00000615722 808 ntBASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 AC018845.2-201ENST00000568326 409 ntBASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SWSAP1Q6NVH7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 IGLL3P-201ENST00000412472 434 ntBASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.23■□□□□ 0.67
SWSAP1Q6NVH7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 PAWRP1-201ENST00000451083 565 ntBASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
SWSAP1Q6NVH7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 YBX2P1-201ENST00000394192 760 ntBASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 AC092865.6-201ENST00000642101 219 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms