Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF43Q68DV7 AC073648.2-201ENST00000510116 352 ntBASIC18.2■□□□□ 0.5
RNF43Q68DV7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF43Q68DV7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
RNF43Q68DV7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RNF43Q68DV7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
RNF43Q68DV7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 AL139384.1-201ENST00000612143 3047 ntBASIC18.2■□□□□ 0.5
RNF43Q68DV7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF43Q68DV7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 AC100803.2-201ENST00000562459 1963 ntBASIC18.19■□□□□ 0.5
RNF43Q68DV7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 PMPCAP1-201ENST00000508114 1576 ntBASIC18.19■□□□□ 0.5
RNF43Q68DV7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.19■□□□□ 0.5
RNF43Q68DV7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
RNF43Q68DV7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF43Q68DV7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RNF43Q68DV7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RNF43Q68DV7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF43Q68DV7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF43Q68DV7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF43Q68DV7 DDX43P3-201ENST00000441064 443 ntBASIC18.18■□□□□ 0.5
RNF43Q68DV7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF43Q68DV7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF43Q68DV7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF43Q68DV7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.18■□□□□ 0.5
RNF43Q68DV7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 MTDHP3-201ENST00000594186 672 ntBASIC18.18■□□□□ 0.5
RNF43Q68DV7 AL139424.1-201ENST00000607572 797 ntBASIC18.18■□□□□ 0.5
RNF43Q68DV7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF43Q68DV7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RNF43Q68DV7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
RNF43Q68DV7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RNF43Q68DV7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
RNF43Q68DV7 KRT18P55-202ENST00000578578 1546 ntBASIC18.18■□□□□ 0.5
RNF43Q68DV7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF43Q68DV7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF43Q68DV7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF43Q68DV7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF43Q68DV7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF43Q68DV7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF43Q68DV7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF43Q68DV7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF43Q68DV7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF43Q68DV7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RNF43Q68DV7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF43Q68DV7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms