Protein–RNA interactions for Protein: Q0VFZ6

CCDC173, Coiled-coil domain-containing protein 173, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC173Q0VFZ6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 TSPY7P-201ENST00000431358 1114 ntBASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC173Q0VFZ6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC173Q0VFZ6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC173Q0VFZ6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
CCDC173Q0VFZ6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.64■□□□□ 0.74
CCDC173Q0VFZ6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC173Q0VFZ6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC173Q0VFZ6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 SLC25A1P3-201ENST00000395415 828 ntBASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 AC133561.5-201ENST00000635547 218 ntBASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC173Q0VFZ6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 KRT17P2-201ENST00000300992 1314 ntBASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 AC004951.3-201ENST00000418645 1148 ntBASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC173Q0VFZ6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms