Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.51■□□□□ 0.39
PRAMEP78395 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PRAMEP78395 NSUN5P1-202ENST00000421140 1535 ntBASIC17.51■□□□□ 0.39
PRAMEP78395 NSUN5P2-203ENST00000457352 1529 ntBASIC17.51■□□□□ 0.39
PRAMEP78395 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
PRAMEP78395 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PRAMEP78395 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PRAMEP78395 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PRAMEP78395 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PRAMEP78395 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PRAMEP78395 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PRAMEP78395 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PRAMEP78395 AP001094.4-201ENST00000579008 2176 ntBASIC17.5■□□□□ 0.39
PRAMEP78395 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.5■□□□□ 0.39
PRAMEP78395 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
PRAMEP78395 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
PRAMEP78395 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.5■□□□□ 0.39
PRAMEP78395 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 KRT8P10-201ENST00000450021 1447 ntBASIC17.5■□□□□ 0.39
PRAMEP78395 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PRAMEP78395 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.5■□□□□ 0.39
PRAMEP78395 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.5■□□□□ 0.39
PRAMEP78395 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.5■□□□□ 0.39
PRAMEP78395 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.5■□□□□ 0.39
PRAMEP78395 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PRAMEP78395 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.5■□□□□ 0.39
PRAMEP78395 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
PRAMEP78395 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.5■□□□□ 0.39
PRAMEP78395 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.5■□□□□ 0.39
PRAMEP78395 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PRAMEP78395 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEP78395 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.5■□□□□ 0.39
PRAMEP78395 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PRAMEP78395 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.49■□□□□ 0.39
PRAMEP78395 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.49■□□□□ 0.39
PRAMEP78395 AC046185.3-201ENST00000623228 1824 ntBASIC17.49■□□□□ 0.39
PRAMEP78395 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
PRAMEP78395 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEP78395 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEP78395 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEP78395 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.49■□□□□ 0.39
PRAMEP78395 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.49■□□□□ 0.39
PRAMEP78395 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEP78395 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEP78395 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.49■□□□□ 0.39
PRAMEP78395 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEP78395 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PRAMEP78395 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.49■□□□□ 0.39
PRAMEP78395 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEP78395 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PRAMEP78395 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEP78395 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.49■□□□□ 0.39
PRAMEP78395 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.49■□□□□ 0.39
PRAMEP78395 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.49■□□□□ 0.39
PRAMEP78395 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEP78395 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.49■□□□□ 0.39
PRAMEP78395 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.49■□□□□ 0.39
PRAMEP78395 NPAP1P7-201ENST00000613027 823 ntBASIC17.49■□□□□ 0.39
PRAMEP78395 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.49■□□□□ 0.39
PRAMEP78395 AC093458.2-201ENST00000623150 629 ntBASIC17.49■□□□□ 0.39
PRAMEP78395 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PRAMEP78395 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.49■□□□□ 0.39
PRAMEP78395 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.49■□□□□ 0.39
PRAMEP78395 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEP78395 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEP78395 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEP78395 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.49■□□□□ 0.39
PRAMEP78395 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PRAMEP78395 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEP78395 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.48■□□□□ 0.39
PRAMEP78395 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
PRAMEP78395 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEP78395 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEP78395 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEP78395 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.48■□□□□ 0.39
PRAMEP78395 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms