Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH12P55289 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH12P55289 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH12P55289 RNF126P1-202ENST00000569893 925 ntBASIC16.18■□□□□ 0.18
CDH12P55289 AL139327.4-201ENST00000612362 153 ntBASIC16.18■□□□□ 0.18
CDH12P55289 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CDH12P55289 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH12P55289 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH12P55289 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CDH12P55289 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDH12P55289 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH12P55289 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CDH12P55289 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH12P55289 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDH12P55289 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH12P55289 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH12P55289 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CDH12P55289 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH12P55289 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDH12P55289 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDH12P55289 Z83836.1-201ENST00000624605 1642 ntBASIC16.17■□□□□ 0.18
CDH12P55289 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CDH12P55289 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH12P55289 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH12P55289 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH12P55289 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH12P55289 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 AL390719.2-201ENST00000606993 987 ntBASIC16.17■□□□□ 0.18
CDH12P55289 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH12P55289 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CDH12P55289 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CDH12P55289 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH12P55289 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDH12P55289 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH12P55289 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDH12P55289 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH12P55289 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH12P55289 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDH12P55289 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDH12P55289 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH12P55289 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH12P55289 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH12P55289 SPDYE13P-201ENST00000445314 798 ntBASIC16.16■□□□□ 0.18
CDH12P55289 AC063952.2-201ENST00000498792 1227 ntBASIC16.16■□□□□ 0.18
CDH12P55289 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH12P55289 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH12P55289 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH12P55289 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms