Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 LINC00896-202ENST00000609602 2128 ntBASIC19.32■□□□□ 0.68
CENPFP49454 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPFP49454 AC241585.1-201ENST00000433527 519 ntBASIC19.32■□□□□ 0.68
CENPFP49454 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.32■□□□□ 0.68
CENPFP49454 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CENPFP49454 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPFP49454 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.32■□□□□ 0.68
CENPFP49454 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.32■□□□□ 0.68
CENPFP49454 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.32■□□□□ 0.68
CENPFP49454 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPFP49454 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPFP49454 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPFP49454 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CENPFP49454 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPFP49454 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.32■□□□□ 0.68
CENPFP49454 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.32■□□□□ 0.68
CENPFP49454 STK19B-204ENST00000512515 211 ntBASIC19.32■□□□□ 0.68
CENPFP49454 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPFP49454 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CENPFP49454 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.32■□□□□ 0.68
CENPFP49454 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPFP49454 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPFP49454 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CENPFP49454 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CENPFP49454 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.31■□□□□ 0.68
CENPFP49454 AP000842.3-202ENST00000569238 1080 ntBASIC19.31■□□□□ 0.68
CENPFP49454 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.31■□□□□ 0.68
CENPFP49454 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CENPFP49454 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.31■□□□□ 0.68
CENPFP49454 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.31■□□□□ 0.68
CENPFP49454 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.31■□□□□ 0.68
CENPFP49454 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.31■□□□□ 0.68
CENPFP49454 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.31■□□□□ 0.68
CENPFP49454 AC004233.3-201ENST00000607794 1269 ntBASIC19.31■□□□□ 0.68
CENPFP49454 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.31■□□□□ 0.68
CENPFP49454 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.31■□□□□ 0.68
CENPFP49454 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPFP49454 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CENPFP49454 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CENPFP49454 MIR658-201ENST00000385210 100 ntBASIC19.3■□□□□ 0.68
CENPFP49454 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CENPFP49454 BCYRN1-201ENST00000418539 200 ntBASIC19.3■□□□□ 0.68
CENPFP49454 AC104794.3-201ENST00000566840 1248 ntBASIC19.3■□□□□ 0.68
CENPFP49454 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CENPFP49454 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CENPFP49454 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPFP49454 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.3■□□□□ 0.68
CENPFP49454 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPFP49454 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.3■□□□□ 0.68
CENPFP49454 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.3■□□□□ 0.68
CENPFP49454 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
CENPFP49454 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.3■□□□□ 0.68
CENPFP49454 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.3■□□□□ 0.68
CENPFP49454 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.3■□□□□ 0.68
CENPFP49454 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CENPFP49454 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPFP49454 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPFP49454 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.3■□□□□ 0.68
CENPFP49454 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.3■□□□□ 0.68
CENPFP49454 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
CENPFP49454 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CENPFP49454 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPFP49454 TP53TG3HP-202ENST00000569755 579 ntBASIC19.3■□□□□ 0.68
CENPFP49454 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPFP49454 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPFP49454 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CENPFP49454 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPFP49454 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CENPFP49454 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CENPFP49454 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CENPFP49454 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.29■□□□□ 0.68
CENPFP49454 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CENPFP49454 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.29■□□□□ 0.68
CENPFP49454 API5-211ENST00000534695 560 ntTSL 5 BASIC19.29■□□□□ 0.68
CENPFP49454 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
CENPFP49454 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CENPFP49454 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CENPFP49454 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.29■□□□□ 0.68
CENPFP49454 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CENPFP49454 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CENPFP49454 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CENPFP49454 MIR346-201ENST00000362234 95 ntBASIC19.29■□□□□ 0.68
CENPFP49454 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CENPFP49454 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms