Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC6A12P48065 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC6A12P48065 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC6A12P48065 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC6A12P48065 PRELID1P1-202ENST00000567272 903 ntBASIC16.7■□□□□ 0.26
SLC6A12P48065 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC6A12P48065 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC6A12P48065 AL139288.1-201ENST00000623748 933 ntBASIC16.7■□□□□ 0.26
SLC6A12P48065 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC6A12P48065 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 AC105020.1-201ENST00000435356 2205 ntBASIC16.69■□□□□ 0.26
SLC6A12P48065 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC6A12P48065 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SLC6A12P48065 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC6A12P48065 BX005266.1-201ENST00000473402 457 ntBASIC16.69■□□□□ 0.26
SLC6A12P48065 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC6A12P48065 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 AC091304.2-201ENST00000564639 760 ntBASIC16.69■□□□□ 0.26
SLC6A12P48065 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.69■□□□□ 0.26
SLC6A12P48065 NKAPP1-205ENST00000585790 367 ntBASIC16.69■□□□□ 0.26
SLC6A12P48065 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC6A12P48065 AL355877.3-201ENST00000622820 899 ntBASIC16.69■□□□□ 0.26
SLC6A12P48065 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SLC6A12P48065 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
SLC6A12P48065 NKILA-202ENST00000614771 2598 ntBASIC16.69■□□□□ 0.26
SLC6A12P48065 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 AC092068.3-201ENST00000587894 2016 ntBASIC16.69■□□□□ 0.26
SLC6A12P48065 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A12P48065 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SLC6A12P48065 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
SLC6A12P48065 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SLC6A12P48065 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC6A12P48065 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC6A12P48065 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC6A12P48065 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 AKR1C7P-201ENST00000305623 895 ntBASIC16.68■□□□□ 0.26
SLC6A12P48065 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC6A12P48065 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC6A12P48065 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SLC6A12P48065 FGFR3P6-201ENST00000457012 610 ntBASIC16.68■□□□□ 0.26
SLC6A12P48065 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC6A12P48065 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC6A12P48065 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.68■□□□□ 0.26
SLC6A12P48065 MTDHP3-201ENST00000594186 672 ntBASIC16.68■□□□□ 0.26
SLC6A12P48065 REXO1L6P-202ENST00000619970 1078 ntBASIC16.68■□□□□ 0.26
SLC6A12P48065 AL022326.1-202ENST00000641533 845 ntBASIC16.68■□□□□ 0.26
SLC6A12P48065 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 AC005915.1-201ENST00000624912 2018 ntBASIC16.68■□□□□ 0.26
SLC6A12P48065 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC6A12P48065 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC6A12P48065 AL356309.3-201ENST00000624132 1934 ntBASIC16.68■□□□□ 0.26
SLC6A12P48065 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SLC6A12P48065 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC6A12P48065 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC6A12P48065 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SLC6A12P48065 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC6A12P48065 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
SLC6A12P48065 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC6A12P48065 AC106886.4-201ENST00000623557 2502 ntBASIC16.67■□□□□ 0.26
SLC6A12P48065 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms