Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SLC1A1P43005 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SLC1A1P43005 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SLC1A1P43005 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 AC233702.3-201ENST00000578656 1387 ntBASIC18.15■□□□□ 0.5
SLC1A1P43005 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC1A1P43005 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
SLC1A1P43005 TP73-AS1-210ENST00000637775 1455 ntBASIC18.14■□□□□ 0.5
SLC1A1P43005 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC1A1P43005 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC1A1P43005 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
SLC1A1P43005 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC1A1P43005 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A1P43005 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A1P43005 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A1P43005 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC1A1P43005 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SLC1A1P43005 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC1A1P43005 DRAXINP1-201ENST00000437611 948 ntBASIC18.14■□□□□ 0.49
SLC1A1P43005 TSSC2-201ENST00000450217 709 ntBASIC18.14■□□□□ 0.49
SLC1A1P43005 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC1A1P43005 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC1A1P43005 AL049597.2-201ENST00000565575 961 ntBASIC18.14■□□□□ 0.49
SLC1A1P43005 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SLC1A1P43005 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC1A1P43005 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
SLC1A1P43005 KRT18P1-202ENST00000452408 1331 ntBASIC18.14■□□□□ 0.49
SLC1A1P43005 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A1P43005 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A1P43005 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
SLC1A1P43005 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC1A1P43005 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A1P43005 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A1P43005 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC1A1P43005 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A1P43005 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC1A1P43005 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC1A1P43005 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC1A1P43005 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
SLC1A1P43005 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SLC1A1P43005 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SLC1A1P43005 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.13■□□□□ 0.49
SLC1A1P43005 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 KLF4P1-201ENST00000412782 1185 ntBASIC18.13■□□□□ 0.49
SLC1A1P43005 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC1A1P43005 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SLC1A1P43005 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.13■□□□□ 0.49
SLC1A1P43005 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.13■□□□□ 0.49
SLC1A1P43005 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SLC1A1P43005 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 AC073592.5-201ENST00000624854 528 ntBASIC18.13■□□□□ 0.49
SLC1A1P43005 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC1A1P43005 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC1A1P43005 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SLC1A1P43005 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC1A1P43005 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A1P43005 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC1A1P43005 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC1A1P43005 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A1P43005 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SLC1A1P43005 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A1P43005 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SLC1A1P43005 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
SLC1A1P43005 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
SLC1A1P43005 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC1A1P43005 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC1A1P43005 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC1A1P43005 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A1P43005 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A1P43005 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A1P43005 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A1P43005 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC1A1P43005 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC1A1P43005 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC1A1P43005 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A1P43005 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A1P43005 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC1A1P43005 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC1A1P43005 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
SLC1A1P43005 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.12■□□□□ 0.49
SLC1A1P43005 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC1A1P43005 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A1P43005 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms