Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CEACAM3P40198 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.17□□□□□ -0.14
CEACAM3P40198 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CEACAM3P40198 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CEACAM3P40198 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.17□□□□□ -0.14
CEACAM3P40198 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.17□□□□□ -0.14
CEACAM3P40198 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.17□□□□□ -0.14
CEACAM3P40198 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CEACAM3P40198 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.17□□□□□ -0.14
CEACAM3P40198 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.17□□□□□ -0.14
CEACAM3P40198 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.17□□□□□ -0.14
CEACAM3P40198 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.17□□□□□ -0.14
CEACAM3P40198 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.17□□□□□ -0.14
CEACAM3P40198 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.17□□□□□ -0.14
CEACAM3P40198 REXO1L6P-202ENST00000619970 1078 ntBASIC14.17□□□□□ -0.14
CEACAM3P40198 AC012313.10-201ENST00000623509 926 ntBASIC14.17□□□□□ -0.14
CEACAM3P40198 AL139288.1-201ENST00000623748 933 ntBASIC14.17□□□□□ -0.14
CEACAM3P40198 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CEACAM3P40198 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.17□□□□□ -0.14
CEACAM3P40198 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 AC046185.3-201ENST00000623228 1824 ntBASIC14.17□□□□□ -0.14
CEACAM3P40198 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 AC009336.1-201ENST00000608941 1553 ntBASIC14.17□□□□□ -0.14
CEACAM3P40198 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CEACAM3P40198 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.16□□□□□ -0.14
CEACAM3P40198 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.16□□□□□ -0.14
CEACAM3P40198 AC016396.2-201ENST00000562575 1417 ntBASIC14.16□□□□□ -0.14
CEACAM3P40198 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CEACAM3P40198 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 AC004870.1-201ENST00000315132 882 ntBASIC14.16□□□□□ -0.14
CEACAM3P40198 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.16□□□□□ -0.14
CEACAM3P40198 DUSP5P1-201ENST00000441325 1139 ntBASIC14.16□□□□□ -0.14
CEACAM3P40198 FAAHP1-202ENST00000446499 1238 ntBASIC14.16□□□□□ -0.14
CEACAM3P40198 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.16□□□□□ -0.14
CEACAM3P40198 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.16□□□□□ -0.14
CEACAM3P40198 AC008608.2-201ENST00000606089 416 ntBASIC14.16□□□□□ -0.14
CEACAM3P40198 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.16□□□□□ -0.14
CEACAM3P40198 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.16□□□□□ -0.14
CEACAM3P40198 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CEACAM3P40198 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CEACAM3P40198 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
CEACAM3P40198 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.15□□□□□ -0.14
CEACAM3P40198 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
CEACAM3P40198 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.15□□□□□ -0.14
CEACAM3P40198 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.15□□□□□ -0.14
CEACAM3P40198 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 SPDYE21P-201ENST00000413323 827 ntBASIC14.15□□□□□ -0.14
CEACAM3P40198 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.15□□□□□ -0.14
CEACAM3P40198 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.15□□□□□ -0.14
CEACAM3P40198 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.15□□□□□ -0.14
CEACAM3P40198 KRT126P-201ENST00000549467 1181 ntBASIC14.15□□□□□ -0.14
CEACAM3P40198 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.15□□□□□ -0.14
CEACAM3P40198 MTDHP3-201ENST00000594186 672 ntBASIC14.15□□□□□ -0.14
CEACAM3P40198 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CEACAM3P40198 AP001269.4-201ENST00000609611 512 ntBASIC14.15□□□□□ -0.14
CEACAM3P40198 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms