Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GDNFP39905 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.13■□□□□ 0.01
GDNFP39905 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GDNFP39905 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 TERF1P1-201ENST00000311003 1181 ntBASIC15.13■□□□□ 0.01
GDNFP39905 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.13■□□□□ 0.01
GDNFP39905 AC005521.1-201ENST00000393351 872 ntBASIC15.13■□□□□ 0.01
GDNFP39905 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 AC113347.1-201ENST00000413321 391 ntBASIC15.13■□□□□ 0.01
GDNFP39905 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.13■□□□□ 0.01
GDNFP39905 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.13■□□□□ 0.01
GDNFP39905 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.13■□□□□ 0.01
GDNFP39905 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.13■□□□□ 0.01
GDNFP39905 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 AC010240.3-201ENST00000607688 395 ntBASIC15.13■□□□□ 0.01
GDNFP39905 AC005363.2-201ENST00000618631 242 ntBASIC15.13■□□□□ 0.01
GDNFP39905 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.13■□□□□ 0.01
GDNFP39905 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GDNFP39905 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GDNFP39905 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.13■□□□□ 0.01
GDNFP39905 AC132872.4-202ENST00000622924 2756 ntBASIC15.13■□□□□ 0.01
GDNFP39905 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
GDNFP39905 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDNFP39905 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.12■□□□□ 0.01
GDNFP39905 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.12■□□□□ 0.01
GDNFP39905 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.12■□□□□ 0.01
GDNFP39905 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.12■□□□□ 0.01
GDNFP39905 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.12■□□□□ 0.01
GDNFP39905 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.12■□□□□ 0.01
GDNFP39905 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GDNFP39905 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.12■□□□□ 0.01
GDNFP39905 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.12■□□□□ 0.01
GDNFP39905 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.12■□□□□ 0.01
GDNFP39905 KRT18P57-201ENST00000443599 1254 ntBASIC15.12■□□□□ 0.01
GDNFP39905 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.12■□□□□ 0.01
GDNFP39905 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 AL512604.3-201ENST00000569583 964 ntBASIC15.12■□□□□ 0.01
GDNFP39905 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.12■□□□□ 0.01
GDNFP39905 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.12■□□□□ 0.01
GDNFP39905 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
GDNFP39905 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.12■□□□□ 0.01
GDNFP39905 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.12■□□□□ 0.01
GDNFP39905 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.12■□□□□ 0.01
GDNFP39905 AC007950.2-201ENST00000615045 2347 ntBASIC15.12■□□□□ 0.01
GDNFP39905 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms