Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNCAP37840 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.32□□□□□ -0.12
SNCAP37840 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.32□□□□□ -0.12
SNCAP37840 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.32□□□□□ -0.12
SNCAP37840 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
SNCAP37840 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNCAP37840 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
SNCAP37840 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNCAP37840 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.32□□□□□ -0.12
SNCAP37840 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.32□□□□□ -0.12
SNCAP37840 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SNCAP37840 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.31□□□□□ -0.12
SNCAP37840 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.31□□□□□ -0.12
SNCAP37840 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SNCAP37840 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SNCAP37840 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 TSPY14P-201ENST00000303979 915 ntBASIC14.31□□□□□ -0.12
SNCAP37840 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SNCAP37840 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.31□□□□□ -0.12
SNCAP37840 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.31□□□□□ -0.12
SNCAP37840 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.31□□□□□ -0.12
SNCAP37840 AC024243.1-201ENST00000609234 778 ntBASIC14.31□□□□□ -0.12
SNCAP37840 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SNCAP37840 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.31□□□□□ -0.12
SNCAP37840 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.31□□□□□ -0.12
SNCAP37840 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.31□□□□□ -0.12
SNCAP37840 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
SNCAP37840 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.31□□□□□ -0.12
SNCAP37840 AC005052.1-201ENST00000625181 2492 ntBASIC14.31□□□□□ -0.12
SNCAP37840 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNCAP37840 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SNCAP37840 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SNCAP37840 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.3□□□□□ -0.12
SNCAP37840 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SNCAP37840 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
SNCAP37840 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.3□□□□□ -0.12
SNCAP37840 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.3□□□□□ -0.12
SNCAP37840 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SNCAP37840 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.3□□□□□ -0.12
SNCAP37840 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
SNCAP37840 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SNCAP37840 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.3□□□□□ -0.12
SNCAP37840 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.3□□□□□ -0.12
SNCAP37840 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.3□□□□□ -0.12
SNCAP37840 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.3□□□□□ -0.12
SNCAP37840 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.3□□□□□ -0.12
SNCAP37840 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.3□□□□□ -0.12
SNCAP37840 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.3□□□□□ -0.12
SNCAP37840 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.3□□□□□ -0.12
SNCAP37840 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.3□□□□□ -0.12
SNCAP37840 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
SNCAP37840 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SNCAP37840 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
SNCAP37840 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNCAP37840 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SNCAP37840 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.3□□□□□ -0.12
SNCAP37840 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SNCAP37840 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.29□□□□□ -0.12
SNCAP37840 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms