Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.23■□□□□ 0.35
HMGCLP35914 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGCLP35914 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 OR7E14P-202ENST00000530490 1290 ntBASIC17.23■□□□□ 0.35
HMGCLP35914 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGCLP35914 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGCLP35914 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
HMGCLP35914 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGCLP35914 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.22■□□□□ 0.35
HMGCLP35914 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLP35914 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.22■□□□□ 0.35
HMGCLP35914 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLP35914 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
HMGCLP35914 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLP35914 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLP35914 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLP35914 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HMGCLP35914 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLP35914 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.22■□□□□ 0.35
HMGCLP35914 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLP35914 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.22■□□□□ 0.35
HMGCLP35914 RPS2P28-201ENST00000314255 741 ntBASIC17.22■□□□□ 0.35
HMGCLP35914 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HMGCLP35914 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.22■□□□□ 0.35
HMGCLP35914 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLP35914 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLP35914 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.22■□□□□ 0.35
HMGCLP35914 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.22■□□□□ 0.35
HMGCLP35914 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.22■□□□□ 0.35
HMGCLP35914 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.22■□□□□ 0.35
HMGCLP35914 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.22■□□□□ 0.35
HMGCLP35914 AC006557.2-201ENST00000592985 1240 ntBASIC17.22■□□□□ 0.35
HMGCLP35914 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLP35914 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLP35914 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLP35914 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLP35914 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.22■□□□□ 0.35
HMGCLP35914 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.22■□□□□ 0.35
HMGCLP35914 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HMGCLP35914 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLP35914 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLP35914 AL590787.1-201ENST00000568856 1315 ntBASIC17.21■□□□□ 0.35
HMGCLP35914 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLP35914 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HMGCLP35914 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLP35914 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLP35914 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLP35914 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCLP35914 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.21■□□□□ 0.35
HMGCLP35914 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLP35914 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLP35914 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
HMGCLP35914 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLP35914 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HMGCLP35914 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLP35914 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLP35914 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCLP35914 GPR89P-201ENST00000407924 1495 ntBASIC17.21■□□□□ 0.35
HMGCLP35914 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLP35914 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.21■□□□□ 0.35
HMGCLP35914 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLP35914 HNRNPDP1-201ENST00000439535 754 ntBASIC17.21■□□□□ 0.35
HMGCLP35914 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCLP35914 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.21■□□□□ 0.35
HMGCLP35914 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.21■□□□□ 0.35
HMGCLP35914 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.21■□□□□ 0.35
HMGCLP35914 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.21■□□□□ 0.35
HMGCLP35914 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCLP35914 AC148477.8-201ENST00000624298 468 ntBASIC17.21■□□□□ 0.35
HMGCLP35914 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCLP35914 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.21■□□□□ 0.35
HMGCLP35914 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCLP35914 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLP35914 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLP35914 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HMGCLP35914 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HMGCLP35914 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HMGCLP35914 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGCLP35914 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGCLP35914 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms