Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
PTPN3P26045 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN3P26045 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN3P26045 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN3P26045 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN3P26045 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN3P26045 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN3P26045 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN3P26045 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PTPN3P26045 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN3P26045 AC009053.2-201ENST00000563701 2365 ntBASIC17.67■□□□□ 0.42
PTPN3P26045 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN3P26045 EGFEM1P-202ENST00000431685 1563 ntBASIC17.67■□□□□ 0.42
PTPN3P26045 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN3P26045 SIGLEC16-201ENST00000599858 1437 ntBASIC17.67■□□□□ 0.42
PTPN3P26045 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
PTPN3P26045 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN3P26045 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN3P26045 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN3P26045 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTPN3P26045 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.67■□□□□ 0.42
PTPN3P26045 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN3P26045 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN3P26045 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.67■□□□□ 0.42
PTPN3P26045 AL732292.2-201ENST00000609649 430 ntBASIC17.67■□□□□ 0.42
PTPN3P26045 AC073592.4-201ENST00000623827 446 ntBASIC17.67■□□□□ 0.42
PTPN3P26045 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN3P26045 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN3P26045 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PTPN3P26045 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
PTPN3P26045 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN3P26045 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN3P26045 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN3P26045 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN3P26045 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN3P26045 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN3P26045 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN3P26045 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN3P26045 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN3P26045 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PTPN3P26045 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN3P26045 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN3P26045 AP005117.1-201ENST00000584346 1413 ntBASIC17.66■□□□□ 0.42
PTPN3P26045 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
PTPN3P26045 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PTPN3P26045 AC079776.2-201ENST00000641154 1609 ntBASIC17.66■□□□□ 0.42
PTPN3P26045 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN3P26045 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN3P26045 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN3P26045 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPN3P26045 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN3P26045 SIGLEC30P-201ENST00000455569 941 ntBASIC17.66■□□□□ 0.42
PTPN3P26045 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.66■□□□□ 0.42
PTPN3P26045 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPN3P26045 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPN3P26045 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPN3P26045 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN3P26045 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN3P26045 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN3P26045 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN3P26045 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
PTPN3P26045 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN3P26045 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PTPN3P26045 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PTPN3P26045 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN3P26045 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN3P26045 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PTPN3P26045 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN3P26045 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PTPN3P26045 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN3P26045 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN3P26045 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN3P26045 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PTPN3P26045 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN3P26045 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN3P26045 AC106795.1-205ENST00000512851 1056 ntBASIC17.65■□□□□ 0.42
PTPN3P26045 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PTPN3P26045 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN3P26045 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPN3P26045 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN3P26045 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN3P26045 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN3P26045 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PTPN3P26045 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PTPN3P26045 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PTPN3P26045 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms