Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
COL8A2P25067 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
COL8A2P25067 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL8A2P25067 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL8A2P25067 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.64□□□□□ -0.07
COL8A2P25067 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL8A2P25067 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
COL8A2P25067 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL8A2P25067 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.64□□□□□ -0.07
COL8A2P25067 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.64□□□□□ -0.07
COL8A2P25067 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL8A2P25067 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.64□□□□□ -0.07
COL8A2P25067 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL8A2P25067 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.64□□□□□ -0.07
COL8A2P25067 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.64□□□□□ -0.07
COL8A2P25067 ELK2BP-201ENST00000415014 1224 ntBASIC14.64□□□□□ -0.07
COL8A2P25067 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.64□□□□□ -0.07
COL8A2P25067 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.64□□□□□ -0.07
COL8A2P25067 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.64□□□□□ -0.07
COL8A2P25067 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.64□□□□□ -0.07
COL8A2P25067 AC007967.2-201ENST00000432613 625 ntBASIC14.64□□□□□ -0.07
COL8A2P25067 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL8A2P25067 KRT18P3-201ENST00000451602 1288 ntBASIC14.64□□□□□ -0.07
COL8A2P25067 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
COL8A2P25067 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL8A2P25067 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.64□□□□□ -0.07
COL8A2P25067 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.64□□□□□ -0.07
COL8A2P25067 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.64□□□□□ -0.07
COL8A2P25067 AL139424.1-201ENST00000607572 797 ntBASIC14.64□□□□□ -0.07
COL8A2P25067 FAM197Y3-203ENST00000618346 717 ntBASIC14.64□□□□□ -0.07
COL8A2P25067 LINC01451-201ENST00000623792 534 ntBASIC14.64□□□□□ -0.07
COL8A2P25067 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL8A2P25067 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL8A2P25067 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL8A2P25067 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL8A2P25067 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
COL8A2P25067 PCDHA12-202ENST00000613593 2588 ntBASIC14.64□□□□□ -0.07
COL8A2P25067 AC006116.8-202ENST00000587620 1550 ntBASIC14.64□□□□□ -0.07
COL8A2P25067 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL8A2P25067 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
COL8A2P25067 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL8A2P25067 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL8A2P25067 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.64□□□□□ -0.07
COL8A2P25067 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
COL8A2P25067 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
COL8A2P25067 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
COL8A2P25067 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.63□□□□□ -0.07
COL8A2P25067 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
COL8A2P25067 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.63□□□□□ -0.07
COL8A2P25067 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.63□□□□□ -0.07
COL8A2P25067 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 AC108751.1-201ENST00000490852 363 ntBASIC14.63□□□□□ -0.07
COL8A2P25067 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.63□□□□□ -0.07
COL8A2P25067 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 AC092865.5-201ENST00000545435 363 ntBASIC14.63□□□□□ -0.07
COL8A2P25067 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
COL8A2P25067 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.63□□□□□ -0.07
COL8A2P25067 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
COL8A2P25067 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
COL8A2P25067 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
COL8A2P25067 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
COL8A2P25067 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.63□□□□□ -0.07
COL8A2P25067 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.63□□□□□ -0.07
COL8A2P25067 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.63□□□□□ -0.07
COL8A2P25067 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL8A2P25067 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.63□□□□□ -0.07
COL8A2P25067 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
COL8A2P25067 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL8A2P25067 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL8A2P25067 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COL8A2P25067 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL8A2P25067 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL8A2P25067 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
COL8A2P25067 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL8A2P25067 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
COL8A2P25067 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COL8A2P25067 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL8A2P25067 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms