Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP24386 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP24386 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CHMP24386 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 IGHV3-47-201ENST00000425060 335 ntBASIC16.23■□□□□ 0.19
CHMP24386 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CHMP24386 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CHMP24386 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.23■□□□□ 0.19
CHMP24386 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.23■□□□□ 0.19
CHMP24386 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.23■□□□□ 0.19
CHMP24386 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.23■□□□□ 0.19
CHMP24386 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.23■□□□□ 0.19
CHMP24386 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.23■□□□□ 0.19
CHMP24386 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CHMP24386 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CHMP24386 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CHMP24386 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CHMP24386 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.23■□□□□ 0.19
CHMP24386 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CHMP24386 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP24386 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP24386 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP24386 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP24386 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP24386 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP24386 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP24386 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CHMP24386 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP24386 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP24386 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP24386 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP24386 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP24386 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP24386 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP24386 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CHMP24386 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP24386 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
CHMP24386 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP24386 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CHMP24386 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.22■□□□□ 0.19
CHMP24386 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CHMP24386 TPM4P1-201ENST00000436100 807 ntBASIC16.22■□□□□ 0.19
CHMP24386 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.22■□□□□ 0.19
CHMP24386 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.22■□□□□ 0.19
CHMP24386 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP24386 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP24386 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP24386 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.22■□□□□ 0.19
CHMP24386 AL121772.3-201ENST00000610840 674 ntBASIC16.22■□□□□ 0.19
CHMP24386 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CHMP24386 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.22■□□□□ 0.19
CHMP24386 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CHMP24386 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP24386 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CHMP24386 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CHMP24386 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP24386 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP24386 AGGF1P2-201ENST00000426656 2106 ntBASIC16.22■□□□□ 0.19
CHMP24386 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP24386 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CHMP24386 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CHMP24386 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CHMP24386 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP24386 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.21■□□□□ 0.19
CHMP24386 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP24386 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
CHMP24386 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP24386 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP24386 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CHMP24386 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP24386 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHMP24386 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP24386 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CHMP24386 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP24386 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP24386 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP24386 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHMP24386 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms