Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 ERGIC3-216ENST00000488384 766 ntTSL 215.63■□□□□ 0.099e-8■■■□□ 15.6
RPS3P23396 RBBP7-209ENST00000468092 630 ntTSL 515.95■□□□□ 0.149e-7■■■□□ 15.6
RPS3P23396 RPL24-204ENST00000470961 572 ntTSL 29.89□□□□□ -0.834e-38■■■□□ 15.6
RPS3P23396 WARS-243ENST00000557722 848 ntTSL 515.97■□□□□ 0.152e-9■■■□□ 15.6
RPS3P23396 RPS3-220ENST00000534555 387 ntTSL 314.93□□□□□ -0.023e-43■■■□□ 15.6
RPS3P23396 GLO1-202ENST00000470973 1939 ntTSL 27.7□□□□□ -1.182e-6■■■□□ 15.6
RPS3P23396 RBM3-210ENST00000491236 729 ntTSL 217.96■□□□□ 0.473e-7■■■□□ 15.6
RPS3P23396 RBM3-211ENST00000491240 951 ntTSL 1 (best)15.61■□□□□ 0.093e-7■■■□□ 15.6
RPS3P23396 THEM6-203ENST00000520217 551 ntTSL 312.79□□□□□ -0.368e-8■■■□□ 15.6
RPS3P23396 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.452e-9■■■□□ 15.6
RPS3P23396 ALG2-201ENST00000238477 2966 ntTSL 216.37■□□□□ 0.212e-9■■■□□ 15.6
RPS3P23396 CES2-204ENST00000561843 454 ntTSL 311.87□□□□□ -0.512e-6■■■□□ 15.6
RPS3P23396 STT3A-204ENST00000525652 607 ntTSL 27.25□□□□□ -1.256e-8■■■□□ 15.6
RPS3P23396 STT3A-212ENST00000529886 542 ntTSL 41.45□□□□□ -2.186e-8■■■□□ 15.6
RPS3P23396 SERINC5-204ENST00000512972 1627 ntTSL 223.61■■□□□ 1.372e-6■■■□□ 15.6
RPS3P23396 SERINC5-206ENST00000632581 1573 ntTSL 223.47■■□□□ 1.352e-6■■■□□ 15.6
RPS3P23396 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.92■■□□□ 1.262e-6■■■□□ 15.6
RPS3P23396 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.532e-6■■■□□ 15.6
RPS3P23396 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.345e-8■■■□□ 15.6
RPS3P23396 CTSC-208ENST00000533897 4344 ntTSL 24.35□□□□□ -1.718e-7■■■□□ 15.6
RPS3P23396 OS9-213ENST00000550372 503 ntTSL 414.37□□□□□ -0.115e-7■■■□□ 15.6
RPS3P23396 SDF4-203ENST00000403997 728 ntTSL 312.86□□□□□ -0.358e-7■■■□□ 15.6
RPS3P23396 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.122e-7■■■□□ 15.6
RPS3P23396 ALYREF-204ENST00000512673 441 ntTSL 214.22□□□□□ -0.132e-14■■■□□ 15.6
RPS3P23396 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.243e-11■■■□□ 15.6
RPS3P23396 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC10.23□□□□□ -0.773e-11■■■□□ 15.6
RPS3P23396 DHCR24-202ENST00000436604 863 ntTSL 39.58□□□□□ -0.885e-19■■■□□ 15.6
RPS3P23396 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.988e-11■■■□□ 15.5
RPS3P23396 RNF149-202ENST00000424632 2010 ntTSL 220.09■□□□□ 0.818e-11■■■□□ 15.5
RPS3P23396 FADS1-217ENST00000544309 581 ntTSL 317.52■□□□□ 0.43e-10■■■□□ 15.5
RPS3P23396 FADS1-202ENST00000421879 583 ntTSL 316.52■□□□□ 0.243e-10■■■□□ 15.5
RPS3P23396 FADS1-209ENST00000491310 525 ntTSL 513.86□□□□□ -0.193e-10■■■□□ 15.5
RPS3P23396 FADS1-203ENST00000424501 926 ntTSL 312.89□□□□□ -0.353e-10■■■□□ 15.5
RPS3P23396 FADS1-205ENST00000448607 559 ntTSL 412.02□□□□□ -0.493e-10■■■□□ 15.5
RPS3P23396 UBB-206ENST00000577958 376 ntTSL 214.76□□□□□ -0.055e-15■■■□□ 15.5
RPS3P23396 CAT-205ENST00000534710 1020 ntTSL 1 (best)11.15□□□□□ -0.621e-6■■■□□ 15.5
RPS3P23396 CLTC-214ENST00000585198 477 ntTSL 54.3□□□□□ -1.722e-22■■■□□ 15.5
RPS3P23396 IGSF1-202ENST00000370900 1786 ntTSL 2 BASIC11.4□□□□□ -0.584e-6■■■□□ 15.5
RPS3P23396 IGSF1-203ENST00000370901 1820 ntTSL 1 (best) BASIC10.77□□□□□ -0.684e-6■■■□□ 15.5
RPS3P23396 AKR1A1-208ENST00000476957 910 ntTSL 317.01■□□□□ 0.311e-6■■■□□ 15.5
RPS3P23396 TAPBP-239ENST00000476333 726 ntTSL 215.55■□□□□ 0.085e-8■■■□□ 15.5
RPS3P23396 NDRG1-219ENST00000521544 709 ntTSL 512.29□□□□□ -0.441e-7■■■□□ 15.5
RPS3P23396 NDRG1-215ENST00000520943 536 ntTSL 49.62□□□□□ -0.871e-7■■■□□ 15.5
RPS3P23396 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.994e-7■■■□□ 15.5
RPS3P23396 PRAME-209ENST00000439106 891 ntAPPRIS ALT2 TSL 313.36□□□□□ -0.278e-17■■■□□ 15.5
RPS3P23396 C3-213ENST00000600744 708 ntTSL 513.91□□□□□ -0.187e-52■■■□□ 15.5
RPS3P23396 ANXA2-226ENST00000559818 878 ntTSL 514.61□□□□□ -0.072e-7■■■□□ 15.5
RPS3P23396 ANXA2-214ENST00000558985 780 ntTSL 29.62□□□□□ -0.872e-7■■■□□ 15.5
RPS3P23396 ANXA2-232ENST00000560466 665 ntTSL 59.17□□□□□ -0.942e-7■■■□□ 15.5
RPS3P23396 SND1-209ENST00000470723 568 ntTSL 412.47□□□□□ -0.419e-13■■■□□ 15.5
RPS3P23396 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.385e-7■■■□□ 15.5
RPS3P23396 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.437e-8■■■□□ 15.5
RPS3P23396 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.437e-8■■■□□ 15.5
RPS3P23396 DDX17-203ENST00000403230 2322 ntAPPRIS ALT2 TSL 1 (best)16.09■□□□□ 0.177e-8■■■□□ 15.5
RPS3P23396 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.137e-8■■■□□ 15.5
RPS3P23396 DDX17-201ENST00000216019 6441 ntTSL 1 (best)12.32□□□□□ -0.447e-8■■■□□ 15.5
RPS3P23396 UQCRC2-208ENST00000565464 929 ntTSL 59.01□□□□□ -0.977e-9■■■□□ 15.5
RPS3P23396 ATP5G2-206ENST00000550241 406 ntTSL 38.39□□□□□ -1.072e-10■■■□□ 15.5
RPS3P23396 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.294e-9■■■□□ 15.5
RPS3P23396 MAPK3-207ENST00000466521 1878 ntTSL 529.38■■■□□ 2.294e-9■■■□□ 15.5
RPS3P23396 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.25■■■□□ 2.274e-9■■■□□ 15.5
RPS3P23396 MAPK3-214ENST00000490298 1718 ntTSL 526.6■■□□□ 1.854e-9■■■□□ 15.5
RPS3P23396 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.394e-9■■■□□ 15.5
RPS3P23396 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.76■■□□□ 1.394e-9■■■□□ 15.5
RPS3P23396 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.99■□□□□ 0.156e-6■■■□□ 15.5
RPS3P23396 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.17■□□□□ 0.026e-6■■■□□ 15.5
RPS3P23396 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.57□□□□□ -0.244e-9■■■□□ 15.5
RPS3P23396 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC12.81□□□□□ -0.366e-6■■■□□ 15.5
RPS3P23396 MAPK3-211ENST00000483869 738 ntTSL 310.16□□□□□ -0.784e-9■■■□□ 15.5
RPS3P23396 MAPK3-210ENST00000481230 465 ntTSL 59.59□□□□□ -0.874e-9■■■□□ 15.5
RPS3P23396 OLA1-203ENST00000392560 711 ntTSL 58.65□□□□□ -1.024e-9■■■□□ 15.5
RPS3P23396 C20orf24-207ENST00000494506 874 ntTSL 27.9□□□□□ -1.144e-9■■■□□ 15.5
RPS3P23396 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.196e-6■■■□□ 15.5
RPS3P23396 HERPUD1-206ENST00000563343 567 ntTSL 47.12□□□□□ -1.272e-6■■■□□ 15.5
RPS3P23396 OLA1-208ENST00000462000 656 ntTSL 25.98□□□□□ -1.454e-9■■■□□ 15.5
RPS3P23396 HERPUD1-217ENST00000569429 562 ntTSL 45.82□□□□□ -1.482e-6■■■□□ 15.5
RPS3P23396 OLA1-207ENST00000429575 485 ntTSL 31.17□□□□□ -2.224e-9■■■□□ 15.5
RPS3P23396 EML2-212ENST00000588000 1542 ntTSL 221.43■■□□□ 1.021e-7■■■□□ 15.5
RPS3P23396 EML2-218ENST00000588610 1087 ntTSL 1 (best)19.9■□□□□ 0.781e-7■■■□□ 15.5
RPS3P23396 MYH9-207ENST00000473022 400 ntTSL 210.7□□□□□ -0.73e-11■■■□□ 15.5
RPS3P23396 LMAN1-202ENST00000587561 1181 ntTSL 213.48□□□□□ -0.252e-10■■■□□ 15.5
RPS3P23396 FN1-225ENST00000494446 676 ntTSL 26.17□□□□□ -1.425e-59■■■□□ 15.5
RPS3P23396 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.348e-11■■■□□ 15.5
RPS3P23396 UQCRC2-212ENST00000618892 586 ntTSL 30.68□□□□□ -2.38e-10■■■□□ 15.5
RPS3P23396 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.37□□□□□ -0.433e-6■■■□□ 15.5
RPS3P23396 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.31□□□□□ -0.443e-6■■■□□ 15.5
RPS3P23396 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.483e-6■■■□□ 15.5
RPS3P23396 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.223e-6■■■□□ 15.5
RPS3P23396 C3-208ENST00000596548 576 ntTSL 32.43□□□□□ -2.022e-27■■■□□ 15.5
RPS3P23396 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.491e-16■■■□□ 15.5
RPS3P23396 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.92■□□□□ 0.462e-6■■■□□ 15.5
RPS3P23396 NDRG1-225ENST00000522890 581 ntTSL 514.85□□□□□ -0.031e-7■■■□□ 15.5
RPS3P23396 NDRG1-213ENST00000519580 550 ntTSL 512.29□□□□□ -0.441e-7■■■□□ 15.5
RPS3P23396 ACOX1-203ENST00000572047 2441 ntTSL 214.2□□□□□ -0.145e-6■■■□□ 15.5
RPS3P23396 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.335e-6■■■□□ 15.5
RPS3P23396 ACOX1-204ENST00000573078 2417 ntTSL 211.07□□□□□ -0.645e-6■■■□□ 15.5
RPS3P23396 ACOX1-202ENST00000301608 2215 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.845e-6■■■□□ 15.5
RPS3P23396 KDELR1-202ENST00000594643 561 ntTSL 219.51■□□□□ 0.712e-18■■■□□ 15.5
RPS3P23396 STT3A-202ENST00000524639 582 ntTSL 24.89□□□□□ -1.631e-7■■■□□ 15.5
RPS3P23396 MFSD12-207ENST00000588626 525 ntTSL 317.38■□□□□ 0.372e-8■■■□□ 15.5
Retrieved 100 of 24,271 protein–RNA pairs in 498.6 ms