RNA–Protein interactions for RNA: ENST00000585198.1

CLTC-214, Transcript of clathrin heavy chain, humanhuman

TSL 5

Gene CLTC, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-214ENST00000585198 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
CLTC-214ENST00000585198 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
CLTC-214ENST00000585198 SENP3Q9H4L4 574 aaPredicted RBP21.33■■□□□ 1.01
CLTC-214ENST00000585198 PHF23Q9BUL5 403 aaPredicted RBP21.15■□□□□ 0.98
CLTC-214ENST00000585198 FOXD1Q16676 465 aa19.81■□□□□ 0.76
CLTC-214ENST00000585198 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
CLTC-214ENST00000585198 PPP6R1Q9UPN7 881 aa18.76■□□□□ 0.59
CLTC-214ENST00000585198 ADRA2BP18089 450 aa18.71■□□□□ 0.59
CLTC-214ENST00000585198 PIAS4Q8N2W9 510 aaPredicted RBP18.57■□□□□ 0.56
CLTC-214ENST00000585198 MSH5O43196 834 aa18.45■□□□□ 0.54
CLTC-214ENST00000585198 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
CLTC-214ENST00000585198 SCAF1Q9H7N4 1312 aaKnown RBP17.2■□□□□ 0.34
CLTC-214ENST00000585198 MAPK8IP2Q13387 824 aaPredicted RBP17.07■□□□□ 0.32
CLTC-214ENST00000585198 PPP4R3CPQ6ZMV5 832 aa17.05■□□□□ 0.32
CLTC-214ENST00000585198 DMRT2Q9Y5R5 561 aa16.98■□□□□ 0.31
CLTC-214ENST00000585198 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
CLTC-214ENST00000585198 NCBP3Q53F19 620 aaKnown RBP16.53■□□□□ 0.24
CLTC-214ENST00000585198 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
CLTC-214ENST00000585198 RNF216Q9NWF9 866 aaPredicted RBP16.46■□□□□ 0.23
CLTC-214ENST00000585198 NPM3O75607 178 aaKnown RBP16.26■□□□□ 0.19
CLTC-214ENST00000585198 KCNA4P22459 653 aa16.22■□□□□ 0.19
CLTC-214ENST00000585198 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
CLTC-214ENST00000585198 DNAJC5BQ9UF47 199 aa15.98■□□□□ 0.15
CLTC-214ENST00000585198 RNF39Q9H2S5 420 aa15.77■□□□□ 0.12
CLTC-214ENST00000585198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.66■□□□□ 0.1
CLTC-214ENST00000585198 C1QBPQ07021 282 aaKnown RBP15.58■□□□□ 0.08
CLTC-214ENST00000585198 CACNB1Q02641 598 aaPredicted RBP15.57■□□□□ 0.08
CLTC-214ENST00000585198 SLC4A2P04920 1241 aa15.45■□□□□ 0.06
CLTC-214ENST00000585198 SLC4A1APQ9BWU0 796 aaKnown RBP15.39■□□□□ 0.05
CLTC-214ENST00000585198 U3KPZ7 1027 aaPredicted RBP15.39■□□□□ 0.05
CLTC-214ENST00000585198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.11■□□□□ 0.01
CLTC-214ENST00000585198 HNRNPUL2Q1KMD3 747 aaKnown RBP15.11■□□□□ 0.01
CLTC-214ENST00000585198 FOXD4L1Q9NU39 408 aa15.07■□□□□ 0
CLTC-214ENST00000585198 MYCNP04198 464 aaPredicted RBP15.05■□□□□ -0
CLTC-214ENST00000585198 APLP2Q06481 763 aa15.05■□□□□ -0
CLTC-214ENST00000585198 SAMD1Q6SPF0 538 aaPredicted RBP15.03■□□□□ -0
CLTC-214ENST00000585198 SPINK5Q9NQ38 1064 aaPredicted RBP15.03■□□□□ -0
CLTC-214ENST00000585198 CAPN15O75808 1086 aa14.98□□□□□ -0.01
CLTC-214ENST00000585198 ZBTB22O15209 634 aa14.92□□□□□ -0.02
CLTC-214ENST00000585198 ZNF219Q9P2Y4 722 aaPredicted RBP14.87□□□□□ -0.03
CLTC-214ENST00000585198 DSG3P32926 999 aa14.86□□□□□ -0.03
CLTC-214ENST00000585198 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
CLTC-214ENST00000585198 ABCB7O75027 752 aa14.64□□□□□ -0.07
CLTC-214ENST00000585198 ATXN8OSP0DMR3 200 aa14.64□□□□□ -0.07
CLTC-214ENST00000585198 ATF5Q9Y2D1 282 aaPredicted RBP14.63□□□□□ -0.07
CLTC-214ENST00000585198 CSRNP3Q8WYN3 585 aa14.56□□□□□ -0.08
CLTC-214ENST00000585198 POLA2Q14181 598 aa14.53□□□□□ -0.08
CLTC-214ENST00000585198 EHMT2Q96KQ7 1210 aa14.47□□□□□ -0.09
CLTC-214ENST00000585198 ZBTB12Q9Y330 459 aaPredicted RBP14.32□□□□□ -0.12
CLTC-214ENST00000585198 RBM42Q9BTD8 480 aaKnown RBP14.2□□□□□ -0.14
CLTC-214ENST00000585198 FBLN2P98095 1184 aa14.07□□□□□ -0.16
CLTC-214ENST00000585198 OSCARQ8IYS5 282 aa14.03□□□□□ -0.16
CLTC-214ENST00000585198 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
CLTC-214ENST00000585198 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
CLTC-214ENST00000585198 SPDYE2BA6NHP3 402 aa13.89□□□□□ -0.19
CLTC-214ENST00000585198 SPDYE6P0CI01 402 aa13.89□□□□□ -0.19
CLTC-214ENST00000585198 SPDYE2Q495Y8 402 aa13.89□□□□□ -0.19
CLTC-214ENST00000585198 REM2Q8IYK8 340 aaPredicted RBP13.78□□□□□ -0.2
CLTC-214ENST00000585198 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
CLTC-214ENST00000585198 ZNF692Q9BU19 519 aaPredicted RBP13.73□□□□□ -0.21
CLTC-214ENST00000585198 CHRDL2Q6WN34 429 aa13.72□□□□□ -0.21
CLTC-214ENST00000585198 POTEHQ6S545 545 aa13.69□□□□□ -0.22
CLTC-214ENST00000585198 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
CLTC-214ENST00000585198 SPDYE1Q8NFV5 336 aaPredicted RBP13.55□□□□□ -0.24
CLTC-214ENST00000585198 PABPN1Q86U42 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
CLTC-214ENST00000585198 SPDYE4A6NLX3 237 aa13.51□□□□□ -0.25
CLTC-214ENST00000585198 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.253e-8■■■□□ 17.5
CLTC-214ENST00000585198 PIP4P2Q8N4L2 257 aa13.46□□□□□ -0.25
CLTC-214ENST00000585198 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
CLTC-214ENST00000585198 PRR29P0C7W0 189 aa13.31□□□□□ -0.28
CLTC-214ENST00000585198 PROM2Q8N271 834 aa13.3□□□□□ -0.28
CLTC-214ENST00000585198 STAG3Q9UJ98 1225 aa13.3□□□□□ -0.28
CLTC-214ENST00000585198 PRKAR2AP13861 404 aaKnown RBP13.26□□□□□ -0.29
CLTC-214ENST00000585198 FKBP8Q14318 412 aa13.14□□□□□ -0.31
CLTC-214ENST00000585198 CHADLQ6NUI6 762 aa13.14□□□□□ -0.31
CLTC-214ENST00000585198 HAX1O00165 279 aa13.1□□□□□ -0.31
CLTC-214ENST00000585198 CREBZFQ9NS37 354 aa13.07□□□□□ -0.32
CLTC-214ENST00000585198 FARP1Q9Y4F1 1045 aaPredicted RBP13.05□□□□□ -0.32
CLTC-214ENST00000585198 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
CLTC-214ENST00000585198 SP7Q8TDD2 431 aaPredicted RBP13.01□□□□□ -0.33
CLTC-214ENST00000585198 EVX2Q03828 476 aa12.96□□□□□ -0.33
CLTC-214ENST00000585198 MNX1P50219 401 aaPredicted RBP12.91□□□□□ -0.34
CLTC-214ENST00000585198 NPM1P06748 294 aaKnown RBP eCLIP12.86□□□□□ -0.35
CLTC-214ENST00000585198 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
CLTC-214ENST00000585198 FBXO3Q9UK99 471 aa12.85□□□□□ -0.35
CLTC-214ENST00000585198 MIER1Q8N108 512 aa12.83□□□□□ -0.36
CLTC-214ENST00000585198 PLEKHG5O94827 1062 aa12.82□□□□□ -0.36
CLTC-214ENST00000585198 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
CLTC-214ENST00000585198 CLCN6P51797 869 aa12.74□□□□□ -0.37
CLTC-214ENST00000585198 GABBR2O75899 941 aa12.72□□□□□ -0.37
CLTC-214ENST00000585198 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
CLTC-214ENST00000585198 ZRANB1Q9UGI0 708 aa12.72□□□□□ -0.37
CLTC-214ENST00000585198 PAK3O75914 559 aaPredicted RBP12.71□□□□□ -0.37
CLTC-214ENST00000585198 ZBTB47Q9UFB7 747 aaPredicted RBP12.71□□□□□ -0.37
CLTC-214ENST00000585198 VASPP50552 380 aaPredicted RBP12.65□□□□□ -0.38
CLTC-214ENST00000585198 NUBP1P53384 320 aa12.58□□□□□ -0.4
CLTC-214ENST00000585198 RASEFQ8IZ41 740 aa12.58□□□□□ -0.4
CLTC-214ENST00000585198 PHF12Q96QT6 1004 aa12.56□□□□□ -0.4
CLTC-214ENST00000585198 TSPYL2Q9H2G4 693 aaPredicted RBP12.56□□□□□ -0.4
CLTC-214ENST00000585198 CCDC61Q9Y6R9 512 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms