Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT4P19013 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT4P19013 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT4P19013 KRT18P48-201ENST00000434763 852 ntBASIC17.43■□□□□ 0.38
KRT4P19013 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.43■□□□□ 0.38
KRT4P19013 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT4P19013 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.43■□□□□ 0.38
KRT4P19013 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT4P19013 AL136038.4-201ENST00000603606 1261 ntBASIC17.43■□□□□ 0.38
KRT4P19013 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT4P19013 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT4P19013 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT4P19013 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT4P19013 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT4P19013 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT4P19013 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT4P19013 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT4P19013 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT4P19013 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT4P19013 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
KRT4P19013 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT4P19013 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT4P19013 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT4P19013 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT4P19013 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
KRT4P19013 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
KRT4P19013 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT4P19013 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KRT4P19013 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
KRT4P19013 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT4P19013 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT4P19013 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 SNORA78-201ENST00000459373 127 ntBASIC17.42■□□□□ 0.38
KRT4P19013 RASA4DP-201ENST00000460726 1199 ntBASIC17.42■□□□□ 0.38
KRT4P19013 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT4P19013 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT4P19013 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.42■□□□□ 0.38
KRT4P19013 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KRT4P19013 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT4P19013 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KRT4P19013 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT4P19013 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT4P19013 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
KRT4P19013 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT4P19013 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
KRT4P19013 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 AL662844.4-201ENST00000606367 2838 ntBASIC17.41■□□□□ 0.38
KRT4P19013 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT4P19013 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT4P19013 PCDHA1-201ENST00000378133 2726 ntBASIC17.41■□□□□ 0.38
KRT4P19013 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT4P19013 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.41■□□□□ 0.38
KRT4P19013 AC096633.1-201ENST00000422446 749 ntBASIC17.41■□□□□ 0.38
KRT4P19013 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT4P19013 MTCL1P1-201ENST00000446207 792 ntBASIC17.41■□□□□ 0.38
KRT4P19013 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT4P19013 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.41■□□□□ 0.38
KRT4P19013 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT4P19013 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.41■□□□□ 0.38
KRT4P19013 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT4P19013 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT4P19013 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
KRT4P19013 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
KRT4P19013 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT4P19013 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
KRT4P19013 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms