Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
VCLP18206 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.48■□□□□ 0.39
VCLP18206 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCLP18206 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.47■□□□□ 0.39
VCLP18206 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.47■□□□□ 0.39
VCLP18206 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.47■□□□□ 0.39
VCLP18206 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VCLP18206 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.47■□□□□ 0.39
VCLP18206 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VCLP18206 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
VCLP18206 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.47■□□□□ 0.39
VCLP18206 AL391005.1-201ENST00000623953 2435 ntBASIC17.47■□□□□ 0.39
VCLP18206 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCLP18206 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCLP18206 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VCLP18206 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.47■□□□□ 0.39
VCLP18206 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.47■□□□□ 0.39
VCLP18206 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VCLP18206 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.47■□□□□ 0.39
VCLP18206 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.47■□□□□ 0.39
VCLP18206 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.47■□□□□ 0.39
VCLP18206 MIR5100-201ENST00000579544 119 ntBASIC17.47■□□□□ 0.39
VCLP18206 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.47■□□□□ 0.39
VCLP18206 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VCLP18206 AC011467.2-201ENST00000598425 242 ntBASIC17.47■□□□□ 0.39
VCLP18206 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VCLP18206 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCLP18206 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCLP18206 KRT8P47-201ENST00000604727 1398 ntBASIC17.47■□□□□ 0.39
VCLP18206 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.47■□□□□ 0.39
VCLP18206 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCLP18206 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VCLP18206 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.47■□□□□ 0.39
VCLP18206 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VCLP18206 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCLP18206 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.47■□□□□ 0.39
VCLP18206 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
VCLP18206 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
VCLP18206 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.47■□□□□ 0.39
VCLP18206 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VCLP18206 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VCLP18206 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VCLP18206 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.47■□□□□ 0.39
VCLP18206 AL162727.3-201ENST00000635661 2787 ntBASIC17.46■□□□□ 0.39
VCLP18206 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.46■□□□□ 0.39
VCLP18206 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.46■□□□□ 0.39
VCLP18206 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 AC004870.1-201ENST00000315132 882 ntBASIC17.46■□□□□ 0.39
VCLP18206 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.46■□□□□ 0.39
VCLP18206 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.46■□□□□ 0.39
VCLP18206 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
VCLP18206 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.46■□□□□ 0.39
VCLP18206 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.46■□□□□ 0.39
VCLP18206 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.46■□□□□ 0.39
VCLP18206 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.46■□□□□ 0.39
VCLP18206 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.46■□□□□ 0.39
VCLP18206 IFNL4P1-201ENST00000607083 540 ntBASIC17.46■□□□□ 0.39
VCLP18206 AL732292.2-201ENST00000609649 430 ntBASIC17.46■□□□□ 0.39
VCLP18206 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.46■□□□□ 0.39
VCLP18206 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.46■□□□□ 0.39
VCLP18206 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.46■□□□□ 0.39
VCLP18206 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
VCLP18206 AC009949.1-201ENST00000623048 1830 ntBASIC17.46■□□□□ 0.39
VCLP18206 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.46■□□□□ 0.39
VCLP18206 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.46■□□□□ 0.39
VCLP18206 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 AL355312.1-201ENST00000407115 2176 ntBASIC17.46■□□□□ 0.39
VCLP18206 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.46■□□□□ 0.39
VCLP18206 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VCLP18206 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
VCLP18206 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
VCLP18206 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.46■□□□□ 0.38
VCLP18206 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
VCLP18206 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
VCLP18206 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.45■□□□□ 0.38
VCLP18206 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.45■□□□□ 0.38
VCLP18206 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.45■□□□□ 0.38
VCLP18206 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms