Protein–RNA interactions for Protein: P13796

LCP1, Plastin-2, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1P13796 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.27■□□□□ 0.51
LCP1P13796 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LCP1P13796 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LCP1P13796 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.27■□□□□ 0.51
LCP1P13796 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LCP1P13796 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LCP1P13796 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
LCP1P13796 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.26■□□□□ 0.51
LCP1P13796 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCP1P13796 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCP1P13796 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LCP1P13796 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.26■□□□□ 0.51
LCP1P13796 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LCP1P13796 KRT18P67-201ENST00000432816 1264 ntBASIC18.26■□□□□ 0.51
LCP1P13796 HNRNPDP1-201ENST00000439535 754 ntBASIC18.26■□□□□ 0.51
LCP1P13796 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LCP1P13796 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LCP1P13796 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.26■□□□□ 0.51
LCP1P13796 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.26■□□□□ 0.51
LCP1P13796 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LCP1P13796 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCP1P13796 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCP1P13796 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCP1P13796 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCP1P13796 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCP1P13796 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LCP1P13796 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCP1P13796 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LCP1P13796 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCP1P13796 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCP1P13796 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.26■□□□□ 0.51
LCP1P13796 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LCP1P13796 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LCP1P13796 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCP1P13796 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCP1P13796 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LCP1P13796 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.25■□□□□ 0.51
LCP1P13796 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.25■□□□□ 0.51
LCP1P13796 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCP1P13796 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.25■□□□□ 0.51
LCP1P13796 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCP1P13796 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LCP1P13796 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LCP1P13796 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LCP1P13796 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCP1P13796 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCP1P13796 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCP1P13796 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.25■□□□□ 0.51
LCP1P13796 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.25■□□□□ 0.51
LCP1P13796 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCP1P13796 OR7E14P-202ENST00000530490 1290 ntBASIC18.25■□□□□ 0.51
LCP1P13796 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.25■□□□□ 0.51
LCP1P13796 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.25■□□□□ 0.51
LCP1P13796 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LCP1P13796 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCP1P13796 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCP1P13796 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCP1P13796 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCP1P13796 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCP1P13796 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCP1P13796 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LCP1P13796 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.25■□□□□ 0.51
LCP1P13796 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCP1P13796 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LCP1P13796 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCP1P13796 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCP1P13796 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LCP1P13796 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.24■□□□□ 0.51
LCP1P13796 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCP1P13796 AC016396.2-201ENST00000562575 1417 ntBASIC18.24■□□□□ 0.51
LCP1P13796 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCP1P13796 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCP1P13796 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCP1P13796 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.24■□□□□ 0.51
LCP1P13796 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LCP1P13796 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCP1P13796 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.24■□□□□ 0.51
LCP1P13796 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.24■□□□□ 0.51
LCP1P13796 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCP1P13796 AC026396.1-201ENST00000419388 421 ntBASIC18.24■□□□□ 0.51
LCP1P13796 LINC00982-205ENST00000420957 435 ntBASIC18.24■□□□□ 0.51
LCP1P13796 AC018712.1-201ENST00000455767 687 ntBASIC18.24■□□□□ 0.51
LCP1P13796 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.24■□□□□ 0.51
LCP1P13796 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.24■□□□□ 0.51
LCP1P13796 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.24■□□□□ 0.51
LCP1P13796 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.24■□□□□ 0.51
LCP1P13796 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.24■□□□□ 0.51
LCP1P13796 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCP1P13796 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCP1P13796 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LCP1P13796 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.24■□□□□ 0.51
LCP1P13796 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCP1P13796 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.24■□□□□ 0.51
LCP1P13796 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LCP1P13796 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCP1P13796 LETM1P2-201ENST00000597330 2178 ntBASIC18.24■□□□□ 0.51
LCP1P13796 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCP1P13796 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCP1P13796 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LCP1P13796 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms