Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC29.25■■■□□ 2.27
CFTRP13569 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC29.25■■■□□ 2.27
CFTRP13569 BANF1P1-201ENST00000553684 263 ntBASIC29.25■■■□□ 2.27
CFTRP13569 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC29.25■■■□□ 2.27
CFTRP13569 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC29.25■■■□□ 2.27
CFTRP13569 AL606495.2-201ENST00000605867 535 ntBASIC29.25■■■□□ 2.27
CFTRP13569 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CFTRP13569 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CFTRP13569 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC29.25■■■□□ 2.27
CFTRP13569 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC29.25■■■□□ 2.27
CFTRP13569 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CFTRP13569 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC29.25■■■□□ 2.27
CFTRP13569 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CFTRP13569 AC138969.3-201ENST00000546612 1459 ntBASIC29.25■■■□□ 2.27
CFTRP13569 AC138932.2-201ENST00000548268 1459 ntBASIC29.25■■■□□ 2.27
CFTRP13569 AC126755.4-201ENST00000549796 1459 ntBASIC29.25■■■□□ 2.27
CFTRP13569 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC29.24■■■□□ 2.27
CFTRP13569 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC29.24■■■□□ 2.27
CFTRP13569 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CFTRP13569 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CFTRP13569 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CFTRP13569 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CFTRP13569 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC29.24■■■□□ 2.27
CFTRP13569 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC29.24■■■□□ 2.27
CFTRP13569 ZNF890P-202ENST00000530367 1156 ntBASIC29.24■■■□□ 2.27
CFTRP13569 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC29.24■■■□□ 2.27
CFTRP13569 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC29.24■■■□□ 2.27
CFTRP13569 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CFTRP13569 RAB34-223ENST00000636154 730 ntTSL 2 BASIC29.24■■■□□ 2.27
CFTRP13569 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC29.24■■■□□ 2.27
CFTRP13569 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CFTRP13569 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CFTRP13569 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CFTRP13569 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC29.24■■■□□ 2.27
CFTRP13569 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
CFTRP13569 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CFTRP13569 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC29.23■■■□□ 2.27
CFTRP13569 PRR29-204ENST00000577953 565 ntTSL 4 BASIC29.23■■■□□ 2.27
CFTRP13569 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC29.23■■■□□ 2.27
CFTRP13569 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CFTRP13569 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC29.23■■■□□ 2.27
CFTRP13569 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CFTRP13569 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CFTRP13569 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
CFTRP13569 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CFTRP13569 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CFTRP13569 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CFTRP13569 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CFTRP13569 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC29.23■■■□□ 2.27
CFTRP13569 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC29.23■■■□□ 2.27
CFTRP13569 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC29.23■■■□□ 2.27
CFTRP13569 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CFTRP13569 WASH4P-201ENST00000564273 1246 ntBASIC29.23■■■□□ 2.27
CFTRP13569 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
CFTRP13569 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CFTRP13569 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC29.22■■■□□ 2.27
CFTRP13569 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CFTRP13569 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CFTRP13569 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
CFTRP13569 AC087499.5-201ENST00000452760 1342 ntBASIC29.22■■■□□ 2.27
CFTRP13569 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CFTRP13569 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
CFTRP13569 MIR1909-201ENST00000411312 80 ntBASIC29.22■■■□□ 2.27
CFTRP13569 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC29.22■■■□□ 2.27
CFTRP13569 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC29.22■■■□□ 2.27
CFTRP13569 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
CFTRP13569 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC29.22■■■□□ 2.27
CFTRP13569 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CFTRP13569 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CFTRP13569 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC29.22■■■□□ 2.27
CFTRP13569 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CFTRP13569 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CFTRP13569 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC29.21■■■□□ 2.27
CFTRP13569 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC29.21■■■□□ 2.27
CFTRP13569 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
CFTRP13569 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CFTRP13569 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CFTRP13569 LYSMD4-203ENST00000378904 2122 ntBASIC29.21■■■□□ 2.27
CFTRP13569 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CFTRP13569 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC29.21■■■□□ 2.27
CFTRP13569 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC29.21■■■□□ 2.27
CFTRP13569 PTPA-220ENST00000436883 532 ntTSL 4 BASIC29.21■■■□□ 2.27
CFTRP13569 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC29.21■■■□□ 2.27
CFTRP13569 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC29.21■■■□□ 2.27
CFTRP13569 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC29.21■■■□□ 2.27
CFTRP13569 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC29.21■■■□□ 2.27
CFTRP13569 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC29.21■■■□□ 2.27
CFTRP13569 TOP3BP1-201ENST00000420768 1380 ntBASIC29.21■■■□□ 2.27
CFTRP13569 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CFTRP13569 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
CFTRP13569 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC29.2■■■□□ 2.27
CFTRP13569 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.27
CFTRP13569 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
CFTRP13569 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
CFTRP13569 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC29.2■■■□□ 2.26
CFTRP13569 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CFTRP13569 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC29.2■■■□□ 2.26
CFTRP13569 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC29.2■■■□□ 2.26
CFTRP13569 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC29.2■■■□□ 2.26
CFTRP13569 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC29.2■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms