Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 AP005901.3-202ENST00000581653 237 ntBASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV3-43DP0DP04 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 AC016396.2-201ENST00000562575 1417 ntBASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 AP002414.4-201ENST00000589764 1148 ntBASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 AL353801.3-201ENST00000609898 542 ntBASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV3-43DP0DP04 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 FAM220CP-201ENST00000395253 831 ntBASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 LINC00265-3P-201ENST00000447588 903 ntBASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 TOB2P1-201ENST00000469761 992 ntBASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV3-43DP0DP04 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms