Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 AC092850.2-201ENST00000623821 2697 ntBASIC18.77■□□□□ 0.6
CCDC172P0C7W6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 RCN1P1-201ENST00000400413 996 ntBASIC18.77■□□□□ 0.6
CCDC172P0C7W6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 TMPOP1-202ENST00000424642 1267 ntBASIC18.77■□□□□ 0.6
CCDC172P0C7W6 AC246785.2-201ENST00000432512 513 ntBASIC18.77■□□□□ 0.6
CCDC172P0C7W6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 VENTXP7-201ENST00000475503 772 ntBASIC18.77■□□□□ 0.6
CCDC172P0C7W6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 AC109462.3-201ENST00000573934 613 ntBASIC18.77■□□□□ 0.6
CCDC172P0C7W6 AL138831.2-201ENST00000606564 490 ntBASIC18.77■□□□□ 0.6
CCDC172P0C7W6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC172P0C7W6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CCDC172P0C7W6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC172P0C7W6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.77■□□□□ 0.59
CCDC172P0C7W6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC172P0C7W6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 AC019129.2-201ENST00000609837 1235 ntBASIC18.76■□□□□ 0.59
CCDC172P0C7W6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC172P0C7W6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 AC009533.2-201ENST00000543664 586 ntBASIC18.75■□□□□ 0.59
CCDC172P0C7W6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC172P0C7W6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms