Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 LINC00982-205ENST00000420957 435 ntBASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 MCCD1P2-201ENST00000423228 335 ntBASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 KRT18P2-201ENST00000447938 1258 ntBASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 HCG4B-203ENST00000450128 991 ntBASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB40ALP0C0E4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.21
RAB40ALP0C0E4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
RAB40ALP0C0E4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.33■□□□□ 0.21
RAB40ALP0C0E4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.33■□□□□ 0.21
RAB40ALP0C0E4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB40ALP0C0E4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB40ALP0C0E4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB40ALP0C0E4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 MRPL20P1-201ENST00000400819 433 ntBASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 AC010654.1-201ENST00000615722 808 ntBASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 AC004790.2-201ENST00000623588 572 ntBASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 GNAS-203ENST00000306120 1878 ntBASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 PRORSD1P-202ENST00000563365 2154 ntBASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB40ALP0C0E4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 ACTG1P4-201ENST00000425123 1122 ntBASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms