Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
FREM3P0C091 CROCCP2-202ENST00000412962 2773 ntBASIC15.74■□□□□ 0.11
FREM3P0C091 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.74■□□□□ 0.11
FREM3P0C091 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
FREM3P0C091 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM3P0C091 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.73■□□□□ 0.11
FREM3P0C091 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM3P0C091 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM3P0C091 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
FREM3P0C091 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM3P0C091 AL020989.1-201ENST00000422979 469 ntBASIC15.73■□□□□ 0.11
FREM3P0C091 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM3P0C091 PMS2P1-201ENST00000431037 1228 ntBASIC15.73■□□□□ 0.11
FREM3P0C091 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
FREM3P0C091 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.73■□□□□ 0.11
FREM3P0C091 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM3P0C091 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM3P0C091 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 AP000867.4-201ENST00000641616 219 ntBASIC15.73■□□□□ 0.11
FREM3P0C091 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.73■□□□□ 0.11
FREM3P0C091 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM3P0C091 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
FREM3P0C091 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
FREM3P0C091 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM3P0C091 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.73■□□□□ 0.11
FREM3P0C091 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM3P0C091 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.73■□□□□ 0.11
FREM3P0C091 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM3P0C091 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM3P0C091 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.73■□□□□ 0.11
FREM3P0C091 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.73■□□□□ 0.11
FREM3P0C091 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.73■□□□□ 0.11
FREM3P0C091 LINC01451-201ENST00000623792 534 ntBASIC15.73■□□□□ 0.11
FREM3P0C091 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.73■□□□□ 0.11
FREM3P0C091 AL022326.1-202ENST00000641533 845 ntBASIC15.73■□□□□ 0.11
FREM3P0C091 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM3P0C091 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
FREM3P0C091 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM3P0C091 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.72■□□□□ 0.11
FREM3P0C091 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
FREM3P0C091 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.72■□□□□ 0.11
FREM3P0C091 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.72■□□□□ 0.11
FREM3P0C091 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.72■□□□□ 0.11
FREM3P0C091 Z83851.2-201ENST00000609564 659 ntBASIC15.72■□□□□ 0.11
FREM3P0C091 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.72■□□□□ 0.11
FREM3P0C091 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.72■□□□□ 0.11
FREM3P0C091 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.72■□□□□ 0.11
FREM3P0C091 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.72■□□□□ 0.11
FREM3P0C091 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
FREM3P0C091 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.72■□□□□ 0.11
FREM3P0C091 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FREM3P0C091 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
FREM3P0C091 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.71■□□□□ 0.11
FREM3P0C091 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM3P0C091 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
FREM3P0C091 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM3P0C091 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FREM3P0C091 UNC93B6-202ENST00000528242 690 ntBASIC15.71■□□□□ 0.11
FREM3P0C091 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.71■□□□□ 0.11
FREM3P0C091 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM3P0C091 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM3P0C091 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM3P0C091 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM3P0C091 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
FREM3P0C091 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FREM3P0C091 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM3P0C091 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms