Protein–RNA interactions for Protein: P09327

VIL1, Villin-1, humanhuman

Known RBP Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1P09327 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VIL1P09327 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.54■□□□□ 0.88
VIL1P09327 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.54■□□□□ 0.88
VIL1P09327 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VIL1P09327 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VIL1P09327 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
VIL1P09327 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.54■□□□□ 0.88
VIL1P09327 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VIL1P09327 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VIL1P09327 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.53■□□□□ 0.88
VIL1P09327 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 AC138028.4-201ENST00000564984 1845 ntBASIC20.53■□□□□ 0.88
VIL1P09327 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.53■□□□□ 0.88
VIL1P09327 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
VIL1P09327 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
VIL1P09327 SPDYE7P-202ENST00000420373 878 ntBASIC20.53■□□□□ 0.88
VIL1P09327 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.53■□□□□ 0.88
VIL1P09327 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.53■□□□□ 0.88
VIL1P09327 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.53■□□□□ 0.88
VIL1P09327 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.53■□□□□ 0.88
VIL1P09327 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.53■□□□□ 0.88
VIL1P09327 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.53■□□□□ 0.88
VIL1P09327 LINC02560-201ENST00000596379 459 ntBASIC20.53■□□□□ 0.88
VIL1P09327 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.53■□□□□ 0.88
VIL1P09327 AL158211.3-201ENST00000607385 239 ntBASIC20.53■□□□□ 0.88
VIL1P09327 AC012645.4-201ENST00000610691 1061 ntBASIC20.53■□□□□ 0.88
VIL1P09327 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 AC008761.3-201ENST00000624803 892 ntBASIC20.53■□□□□ 0.88
VIL1P09327 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.53■□□□□ 0.88
VIL1P09327 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
VIL1P09327 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VIL1P09327 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
VIL1P09327 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.53■□□□□ 0.88
VIL1P09327 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VIL1P09327 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.53■□□□□ 0.88
VIL1P09327 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VIL1P09327 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VIL1P09327 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VIL1P09327 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VIL1P09327 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VIL1P09327 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VIL1P09327 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VIL1P09327 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.52■□□□□ 0.88
VIL1P09327 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VIL1P09327 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VIL1P09327 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VIL1P09327 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.52■□□□□ 0.88
VIL1P09327 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.52■□□□□ 0.88
VIL1P09327 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.52■□□□□ 0.88
VIL1P09327 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.52■□□□□ 0.88
VIL1P09327 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.52■□□□□ 0.88
VIL1P09327 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VIL1P09327 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VIL1P09327 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VIL1P09327 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VIL1P09327 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VIL1P09327 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.52■□□□□ 0.87
VIL1P09327 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
VIL1P09327 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
VIL1P09327 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
VIL1P09327 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
VIL1P09327 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.52■□□□□ 0.87
VIL1P09327 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VIL1P09327 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VIL1P09327 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
VIL1P09327 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VIL1P09327 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.51■□□□□ 0.87
VIL1P09327 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VIL1P09327 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.51■□□□□ 0.87
VIL1P09327 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VIL1P09327 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VIL1P09327 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
VIL1P09327 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
VIL1P09327 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.51■□□□□ 0.87
VIL1P09327 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VIL1P09327 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
VIL1P09327 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.51■□□□□ 0.87
VIL1P09327 AC097493.3-201ENST00000509725 367 ntBASIC20.51■□□□□ 0.87
VIL1P09327 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
VIL1P09327 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.51■□□□□ 0.87
VIL1P09327 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.51■□□□□ 0.87
VIL1P09327 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.51■□□□□ 0.87
VIL1P09327 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VIL1P09327 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
VIL1P09327 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.5■□□□□ 0.87
VIL1P09327 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms