Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.48■□□□□ 0.71
TPM3P06753 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.48■□□□□ 0.71
TPM3P06753 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
TPM3P06753 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
TPM3P06753 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
TPM3P06753 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.47■□□□□ 0.71
TPM3P06753 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TPM3P06753 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TPM3P06753 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TPM3P06753 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TPM3P06753 AC009947.2-201ENST00000444014 672 ntBASIC19.47■□□□□ 0.71
TPM3P06753 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.47■□□□□ 0.71
TPM3P06753 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.47■□□□□ 0.71
TPM3P06753 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TPM3P06753 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.47■□□□□ 0.71
TPM3P06753 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
TPM3P06753 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
TPM3P06753 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TPM3P06753 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TPM3P06753 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.47■□□□□ 0.71
TPM3P06753 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.47■□□□□ 0.71
TPM3P06753 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM3P06753 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TPM3P06753 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM3P06753 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TPM3P06753 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TPM3P06753 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TPM3P06753 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.46■□□□□ 0.71
TPM3P06753 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM3P06753 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
TPM3P06753 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM3P06753 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TPM3P06753 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.46■□□□□ 0.71
TPM3P06753 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM3P06753 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TPM3P06753 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.46■□□□□ 0.71
TPM3P06753 TSPY14P-201ENST00000303979 915 ntBASIC19.46■□□□□ 0.71
TPM3P06753 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM3P06753 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TPM3P06753 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.46■□□□□ 0.71
TPM3P06753 AP000525.1-201ENST00000608286 694 ntBASIC19.46■□□□□ 0.71
TPM3P06753 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM3P06753 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TPM3P06753 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.46■□□□□ 0.71
TPM3P06753 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM3P06753 LYSMD4-203ENST00000378904 2122 ntBASIC19.46■□□□□ 0.71
TPM3P06753 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TPM3P06753 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM3P06753 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TPM3P06753 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM3P06753 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
TPM3P06753 KRT8P47-201ENST00000604727 1398 ntBASIC19.45■□□□□ 0.7
TPM3P06753 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.45■□□□□ 0.7
TPM3P06753 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM3P06753 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM3P06753 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TPM3P06753 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM3P06753 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
TPM3P06753 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.45■□□□□ 0.7
TPM3P06753 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM3P06753 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM3P06753 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.45■□□□□ 0.7
TPM3P06753 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM3P06753 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM3P06753 AP000523.1-201ENST00000398242 1049 ntBASIC19.45■□□□□ 0.7
TPM3P06753 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.45■□□□□ 0.7
TPM3P06753 AL158047.1-201ENST00000445918 881 ntBASIC19.45■□□□□ 0.7
TPM3P06753 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM3P06753 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM3P06753 EGLN1P1-201ENST00000531623 762 ntBASIC19.45■□□□□ 0.7
TPM3P06753 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TPM3P06753 MIR4785-201ENST00000585005 73 ntBASIC19.45■□□□□ 0.7
TPM3P06753 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.45■□□□□ 0.7
TPM3P06753 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TPM3P06753 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM3P06753 AC046185.3-201ENST00000623228 1824 ntBASIC19.45■□□□□ 0.7
TPM3P06753 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM3P06753 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
TPM3P06753 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
TPM3P06753 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM3P06753 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms