Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.57■□□□□ 0.4
HLA-DQB2P05538 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.57■□□□□ 0.4
HLA-DQB2P05538 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB2P05538 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DQB2P05538 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.57■□□□□ 0.4
HLA-DQB2P05538 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB2P05538 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB2P05538 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB2P05538 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB2P05538 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB2P05538 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB2P05538 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB2P05538 AC092053.1-201ENST00000605787 1936 ntBASIC17.57■□□□□ 0.4
HLA-DQB2P05538 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 AC064862.7-201ENST00000604520 867 ntBASIC17.56■□□□□ 0.4
HLA-DQB2P05538 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB2P05538 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 AC060834.1-201ENST00000443027 2032 ntBASIC17.55■□□□□ 0.4
HLA-DQB2P05538 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 RN7SL510P-201ENST00000581311 263 ntBASIC17.55■□□□□ 0.4
HLA-DQB2P05538 MTDHP4-201ENST00000600287 670 ntBASIC17.55■□□□□ 0.4
HLA-DQB2P05538 AL691432.3-201ENST00000621860 400 ntBASIC17.55■□□□□ 0.4
HLA-DQB2P05538 TP73-AS1-207ENST00000624167 988 ntBASIC17.55■□□□□ 0.4
HLA-DQB2P05538 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB2P05538 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 SCARNA2-201ENST00000458748 420 ntBASIC17.54■□□□□ 0.4
HLA-DQB2P05538 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 KRT126P-201ENST00000549467 1181 ntBASIC17.54■□□□□ 0.4
HLA-DQB2P05538 AC021087.4-201ENST00000563761 564 ntBASIC17.54■□□□□ 0.4
HLA-DQB2P05538 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DQB2P05538 AC025062.2-201ENST00000605477 670 ntBASIC17.54■□□□□ 0.4
HLA-DQB2P05538 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms