Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSPG5O95196 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.59■□□□□ 0.57
CSPG5O95196 AC096734.2-201ENST00000562054 433 ntBASIC18.59■□□□□ 0.57
CSPG5O95196 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.59■□□□□ 0.57
CSPG5O95196 AC239800.4-201ENST00000603712 296 ntBASIC18.59■□□□□ 0.57
CSPG5O95196 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSPG5O95196 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CSPG5O95196 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSPG5O95196 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSPG5O95196 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CSPG5O95196 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSPG5O95196 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.58■□□□□ 0.57
CSPG5O95196 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CSPG5O95196 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSPG5O95196 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CSPG5O95196 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.58■□□□□ 0.57
CSPG5O95196 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
CSPG5O95196 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSPG5O95196 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.58■□□□□ 0.57
CSPG5O95196 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSPG5O95196 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSPG5O95196 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSPG5O95196 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.58■□□□□ 0.57
CSPG5O95196 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CSPG5O95196 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CSPG5O95196 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
CSPG5O95196 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CSPG5O95196 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CSPG5O95196 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSPG5O95196 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSPG5O95196 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSPG5O95196 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CSPG5O95196 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.58■□□□□ 0.56
CSPG5O95196 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSPG5O95196 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.58■□□□□ 0.56
CSPG5O95196 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSPG5O95196 PAWRP1-201ENST00000451083 565 ntBASIC18.58■□□□□ 0.56
CSPG5O95196 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.58■□□□□ 0.56
CSPG5O95196 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.58■□□□□ 0.56
CSPG5O95196 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.58■□□□□ 0.56
CSPG5O95196 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSPG5O95196 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.58■□□□□ 0.56
CSPG5O95196 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
CSPG5O95196 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.58■□□□□ 0.56
CSPG5O95196 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSPG5O95196 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSPG5O95196 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.58■□□□□ 0.56
CSPG5O95196 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.58■□□□□ 0.56
CSPG5O95196 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSPG5O95196 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CSPG5O95196 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CSPG5O95196 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.57■□□□□ 0.56
CSPG5O95196 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 AC004461.1-201ENST00000412461 403 ntBASIC18.57■□□□□ 0.56
CSPG5O95196 LINC00982-205ENST00000420957 435 ntBASIC18.57■□□□□ 0.56
CSPG5O95196 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.57■□□□□ 0.56
CSPG5O95196 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.57■□□□□ 0.56
CSPG5O95196 AP000344.2-201ENST00000512987 629 ntBASIC18.57■□□□□ 0.56
CSPG5O95196 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.57■□□□□ 0.56
CSPG5O95196 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.57■□□□□ 0.56
CSPG5O95196 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.57■□□□□ 0.56
CSPG5O95196 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.57■□□□□ 0.56
CSPG5O95196 AC004835.2-201ENST00000603762 682 ntBASIC18.57■□□□□ 0.56
CSPG5O95196 AC023141.13-201ENST00000604991 943 ntBASIC18.57■□□□□ 0.56
CSPG5O95196 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.57■□□□□ 0.56
CSPG5O95196 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.57■□□□□ 0.56
CSPG5O95196 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CSPG5O95196 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.57■□□□□ 0.56
CSPG5O95196 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CSPG5O95196 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CSPG5O95196 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG5O95196 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.56■□□□□ 0.56
CSPG5O95196 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.56■□□□□ 0.56
CSPG5O95196 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CSPG5O95196 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 AL133373.2-201ENST00000623187 2828 ntBASIC18.56■□□□□ 0.56
CSPG5O95196 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
CSPG5O95196 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms