Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
USP1O94782 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
USP1O94782 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 SLC25A1P3-201ENST00000395415 828 ntBASIC17.57■□□□□ 0.4
USP1O94782 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.57■□□□□ 0.4
USP1O94782 AC103564.2-201ENST00000432853 1299 ntBASIC17.57■□□□□ 0.4
USP1O94782 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.57■□□□□ 0.4
USP1O94782 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.57■□□□□ 0.4
USP1O94782 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
USP1O94782 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.57■□□□□ 0.4
USP1O94782 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 AC093525.9-201ENST00000624961 1746 ntBASIC17.57■□□□□ 0.4
USP1O94782 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
USP1O94782 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
USP1O94782 AC060834.1-201ENST00000443027 2032 ntBASIC17.57■□□□□ 0.4
USP1O94782 AL049757.1-201ENST00000616842 1596 ntBASIC17.57■□□□□ 0.4
USP1O94782 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
USP1O94782 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
USP1O94782 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.57■□□□□ 0.4
USP1O94782 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.57■□□□□ 0.4
USP1O94782 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
USP1O94782 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.56■□□□□ 0.4
USP1O94782 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
USP1O94782 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 LINC02012-201ENST00000608206 1725 ntBASIC17.56■□□□□ 0.4
USP1O94782 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
USP1O94782 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.56■□□□□ 0.4
USP1O94782 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.56■□□□□ 0.4
USP1O94782 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.56■□□□□ 0.4
USP1O94782 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 FAM220CP-201ENST00000395253 831 ntBASIC17.56■□□□□ 0.4
USP1O94782 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.56■□□□□ 0.4
USP1O94782 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.56■□□□□ 0.4
USP1O94782 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
USP1O94782 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.56■□□□□ 0.4
USP1O94782 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.56■□□□□ 0.4
USP1O94782 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.56■□□□□ 0.4
USP1O94782 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.56■□□□□ 0.4
USP1O94782 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
USP1O94782 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.56■□□□□ 0.4
USP1O94782 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.56■□□□□ 0.4
USP1O94782 AC046185.3-201ENST00000623228 1824 ntBASIC17.56■□□□□ 0.4
USP1O94782 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
USP1O94782 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
USP1O94782 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP1O94782 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
USP1O94782 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
USP1O94782 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 AC005332.1-201ENST00000577698 1310 ntBASIC17.55■□□□□ 0.4
USP1O94782 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.55■□□□□ 0.4
USP1O94782 AC111152.3-201ENST00000569699 673 ntBASIC17.55■□□□□ 0.4
USP1O94782 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
USP1O94782 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.55■□□□□ 0.4
USP1O94782 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.55■□□□□ 0.4
USP1O94782 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.55■□□□□ 0.4
USP1O94782 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.55■□□□□ 0.4
USP1O94782 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.55■□□□□ 0.4
USP1O94782 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP1O94782 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
USP1O94782 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms